BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E10
(760 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 25 1.9
AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprot... 25 3.3
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 25.4 bits (53), Expect = 1.9
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +3
Query: 537 SAEYGCKPIEGMLSHQLKQFRIDGEKSIIQNPSXAQRKEHEK 662
S + +P+ GML Q +Q R ++++ QR++ ++
Sbjct: 60 SGTHSDRPVAGMLQQQQQQQRQPQRQAVVGTQQQQQRRQQQQ 101
>AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprotein
transferase protein.
Length = 103
Score = 24.6 bits (51), Expect = 3.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -2
Query: 435 QHVQRLHFHPQLLYELQQL*IHQCEHQDLSW 343
+H + F+ + YE+ + H CE+ D +W
Sbjct: 65 KHNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,884
Number of Sequences: 2352
Number of extensions: 15000
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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