Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_E07
         (512 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426...    30   0.95 
05_02_0037 + 5883285-5884292                                           29   2.9  
01_01_0529 + 3874865-3876285,3876352-3876367                           29   2.9  
07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115...    28   5.1  
02_05_0372 + 28370589-28371857                                         28   5.1  
12_01_0814 - 7483597-7483818,7484136-7484276,7484370-7484444,748...    27   6.7  
01_01_0873 + 6836746-6836775,6836859-6836918,6837729-6837899,683...    27   6.7  
01_06_0513 - 29944888-29945943                                         27   8.8  

>01_06_0319 -
           28441082-28441102,28441630-28441701,28442568-28442627,
           28442918-28443105,28444300-28444327,28444880-28444907,
           28444942-28445163,28445238-28445409,28446224-28447468,
           28447573-28447741,28447820-28448045,28449096-28449451,
           28449530-28449724,28450655-28450864,28451729-28452004
          Length = 1155

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 230 DVIKELLENHFQESKTKIAPHALMLLA--DVAKCLVTETCLRAVKQAQR 370
           D I E +E HF + +TK+ P A ML +     + L    C+  +K  +R
Sbjct: 405 DQIMETIEKHFCDEETKVLPQARMLFSPEKQRQLLYKSLCVMPLKLLER 453


>05_02_0037 + 5883285-5884292
          Length = 335

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 300 CCWQMWPNVWSPRHAC 347
           CCW   P+VW PR  C
Sbjct: 304 CCWPSPPSVWWPRCGC 319


>01_01_0529 + 3874865-3876285,3876352-3876367
          Length = 478

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 360 CLTARRHVSVTRHLATSANNIRACGAILVLLSWKWFSNSSF 238
           C  A R+V  T H     N I  CG    +  W W  + ++
Sbjct: 321 CPEASRNVCATHHGIKFVNIINQCGGSFSITLWSWCEDGTW 361


>07_01_0163 +
           1149466-1150593,1150733-1150937,1151453-1151485,
           1152244-1153646
          Length = 922

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 357 LTARRHVSVTRHLATSANNIRAC 289
           L  +RHVS TRH  TS+++  +C
Sbjct: 791 LVVQRHVSATRHKRTSSSSSYSC 813


>02_05_0372 + 28370589-28371857
          Length = 422

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 230 DVIKELLENHFQESKTKIAPHALMLLADVAK 322
           DVIK LLE    E+ T+++  AL +L DV +
Sbjct: 242 DVIKSLLELLSDEASTRLSSRALDVLLDVVE 272


>12_01_0814 -
           7483597-7483818,7484136-7484276,7484370-7484444,
           7484706-7484882,7485530-7485685,7485781-7485864,
           7486589-7486661,7487744-7487946,7488046-7488124,
           7488326-7488464,7488559-7488646
          Length = 478

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +2

Query: 164 IKDNNNIDPATLLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETC 343
           I + N++ P  L ++VK+ ++K V +   E+  +   TK  P  L L+A  A C   E C
Sbjct: 179 INNQNHLVPV-LATSVKNEMQKLVAENGSESS-ESKNTKHHPLLLQLIAKEANCKPDEIC 236


>01_01_0873 +
           6836746-6836775,6836859-6836918,6837729-6837899,
           6838308-6838407,6838619-6838710,6838825-6839013
          Length = 213

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 230 DVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETC 343
           D+++  +E +   S  K+ P+A ++   VA+ L   TC
Sbjct: 39  DLLRNWIEEYSDHSFPKLRPYAPLIAGSVARSLACITC 76


>01_06_0513 - 29944888-29945943
          Length = 351

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 124 KAKYSAXKITKEDEXNNDWXQGRGEXRKKEQNDG 23
           KA+    ++T+ED    D  +G G+  K+  +DG
Sbjct: 314 KAQAEIARLTEEDGEEGDLKEGEGDDNKRFGDDG 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,234,483
Number of Sequences: 37544
Number of extensions: 181237
Number of successful extensions: 531
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)