Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E07
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95006-1|AAB53638.1| 63|Homo sapiens D9 splice variant A protein. 47 4e-05
BC009571-1|AAH09571.1| 63|Homo sapiens stimulated by retinoic ... 45 1e-04
U95007-1|AAB53639.1| 58|Homo sapiens D9 splice variant B protein. 33 0.59
BC011610-1|AAH11610.1| 57|Homo sapiens STRA13 protein protein. 33 0.59
AL592301-8|CAI13937.1| 108|Homo sapiens serologically defined c... 29 7.2
AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog (... 29 9.5
AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog (... 29 9.5
AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog (... 29 9.5
AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein. 29 9.5
>U95006-1|AAB53638.1| 63|Homo sapiens D9 splice variant A protein.
Length = 63
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +2
Query: 215 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDV 394
S +K+++ LL HF++ KTK E +R V+QAQ E + +VDV
Sbjct: 8 SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 49
Query: 395 EHIEKCLPQLMLDF 436
+ +EK LPQL+LDF
Sbjct: 50 DQLEKLLPQLLLDF 63
>BC009571-1|AAH09571.1| 63|Homo sapiens stimulated by retinoic
acid 13 homolog (mouse) protein.
Length = 63
Score = 45.2 bits (102), Expect = 1e-04
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +2
Query: 215 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDV 394
S +K+++ LL HF++ KTK E +R V+QAQ E + + DV
Sbjct: 8 SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRADV 49
Query: 395 EHIEKCLPQLMLDF 436
+ +EK LPQL+LDF
Sbjct: 50 DQLEKVLPQLLLDF 63
>U95007-1|AAB53639.1| 58|Homo sapiens D9 splice variant B protein.
Length = 58
Score = 33.1 bits (72), Expect = 0.59
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 215 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDV 394
S +K+++ LL HF++ KTK E +R V+QAQ E + +VDV
Sbjct: 8 SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 49
Query: 395 EHIEKCL 415
+ +EK L
Sbjct: 50 DQLEKLL 56
>BC011610-1|AAH11610.1| 57|Homo sapiens STRA13 protein protein.
Length = 57
Score = 33.1 bits (72), Expect = 0.59
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 215 STIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDV 394
S +K+++ LL HF++ KTK E +R V+QAQ E + +VDV
Sbjct: 7 SGFRKELVSRLLHLHFKDDKTK------------------EAAVRGVRQAQAEDALRVDV 48
Query: 395 EHIEKCL 415
+ +EK L
Sbjct: 49 DQLEKLL 55
>AL592301-8|CAI13937.1| 108|Homo sapiens serologically defined
colon cancer antigen 3 protein.
Length = 108
Score = 29.5 bits (63), Expect = 7.2
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 399 CSTSTLLEPSLCACLTARRHVSVTR 325
CSTS+ ++PS+C LTA + + + R
Sbjct: 38 CSTSSSIDPSMCRALTACQALGIQR 62
>AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 197 LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 328
L V+ + DVI+E+LE HF K K+ P +L +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346
>AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 197 LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 328
L V+ + DVI+E+LE HF K K+ P +L +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346
>AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 197 LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 328
L V+ + DVI+E+LE HF K K+ P +L +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346
>AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein.
Length = 5596
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 197 LLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCL 328
L V+ + DVI+E+LE HF K K+ P +L +V K L
Sbjct: 1306 LAGRVRKQEEIDVIQEVLEKHF---KKKLCPQSLFSKENVLKLL 1346
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,310,405
Number of Sequences: 237096
Number of extensions: 1005767
Number of successful extensions: 2812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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