Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_E02
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to ENSANGP000... 222 6e-57
UniRef50_Q9VSH4 Cluster: CG7185-PA; n=4; Endopterygota|Rep: CG71... 197 2e-49
UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificit... 164 2e-39
UniRef50_A7SHB1 Cluster: Predicted protein; n=1; Nematostella ve... 132 1e-29
UniRef50_Q8N684 Cluster: Cleavage and polyadenylation specificit... 123 5e-27
UniRef50_Q18937 Cluster: Putative uncharacterized protein; n=2; ... 98 2e-19
UniRef50_UPI000065CB8D Cluster: Homolog of Brachydanio rerio "Cp... 67 4e-10
UniRef50_Q4P6J4 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q54RW5 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_A6RC85 Cluster: Predicted protein; n=2; Pezizomycotina|... 59 1e-07
UniRef50_Q00Y64 Cluster: Hydroxymethylpyrimidine kinase; n=3; Os... 58 2e-07
UniRef50_A7P459 Cluster: Chromosome chr1 scaffold_5, whole genom... 58 2e-07
UniRef50_Q9SAF2 Cluster: F3F19.21 protein; n=1; Arabidopsis thal... 56 6e-07
UniRef50_Q651Z0 Cluster: RNA-binding protein-like; n=4; Oryza sa... 54 3e-06
UniRef50_Q012A5 Cluster: Ps16 protein; n=2; Ostreococcus|Rep: Ps... 54 3e-06
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 51 2e-05
UniRef50_A4RBZ1 Cluster: Putative uncharacterized protein; n=2; ... 51 2e-05
UniRef50_Q9FM71 Cluster: Genomic DNA, chromosome 5, P1 clone:MDF... 50 4e-05
UniRef50_A1CJF8 Cluster: RRM domain protein; n=5; Pezizomycotina... 50 5e-05
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 50 7e-05
UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric DNA-... 49 9e-05
UniRef50_UPI000023EAFE Cluster: hypothetical protein FG08870.1; ... 48 2e-04
UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6; Chlorobi... 48 2e-04
UniRef50_Q55XW5 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A3QQP3 Cluster: Chloroplast single strand DNA binding p... 48 2e-04
UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast p... 48 3e-04
UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;... 47 4e-04
UniRef50_Q8SXG7 Cluster: RE72132p; n=7; Endopterygota|Rep: RE721... 47 4e-04
UniRef50_Q4WWS4 Cluster: RRM domain protein; n=4; Pezizomycotina... 47 5e-04
UniRef50_Q10KP0 Cluster: RNA recognition motif family protein, e... 46 9e-04
UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardi... 46 9e-04
UniRef50_Q0V5E5 Cluster: Putative uncharacterized protein; n=2; ... 46 9e-04
UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast p... 46 9e-04
UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 - Nico... 46 0.001
UniRef50_Q9SVM8 Cluster: Glycine-rich RNA-binding protein 2, mit... 46 0.001
UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding prote... 45 0.002
UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.003
UniRef50_Q5EUH9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole geno... 44 0.003
UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 44 0.003
UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;... 44 0.005
UniRef50_Q01IS3 Cluster: OSIGBa0128P10.1 protein; n=4; Oryza sat... 44 0.005
UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 43 0.006
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 43 0.006
UniRef50_A1C467 Cluster: RNA binding domain protein; n=1; Asperg... 43 0.006
UniRef50_Q6C9S9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 43 0.008
UniRef50_P82277 Cluster: Plastid-specific 30S ribosomal protein ... 43 0.008
UniRef50_Q67JJ7 Cluster: Glycine-rich RNA-binding protein; n=4; ... 42 0.011
UniRef50_O04240 Cluster: RNA- or ssDNA-binding protein; n=2; Pap... 42 0.011
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 42 0.011
UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamo... 42 0.014
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 42 0.014
UniRef50_A7F6E1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.032
UniRef50_Q6C1T7 Cluster: Similar to DEHA0A13563g Debaryomyces ha... 38 0.036
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 40 0.043
UniRef50_A7NXI6 Cluster: Chromosome chr5 scaffold_2, whole genom... 40 0.043
UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of s... 40 0.043
UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA ... 40 0.056
UniRef50_A0E3P7 Cluster: Chromosome undetermined scaffold_77, wh... 40 0.056
UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845 Schizosacch... 40 0.056
UniRef50_A2R8K5 Cluster: Contig An16c0230, complete genome; n=2;... 40 0.056
UniRef50_Q03250 Cluster: Glycine-rich RNA-binding protein 7; n=1... 40 0.056
UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular org... 40 0.075
UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5; Bacteroidetes... 40 0.075
UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gb... 40 0.075
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 40 0.075
UniRef50_P40565 Cluster: U2 snRNP component IST3; n=5; Saccharom... 40 0.075
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 39 0.099
UniRef50_A2E2A9 Cluster: Eukaryotic translation initiation facto... 39 0.099
UniRef50_Q7SET9 Cluster: Predicted protein; n=2; Sordariales|Rep... 39 0.099
UniRef50_A5E562 Cluster: Putative uncharacterized protein; n=1; ... 39 0.099
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 39 0.13
UniRef50_UPI0000499FA7 Cluster: RNA-binding protein; n=2; Entamo... 38 0.17
UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein; ... 38 0.17
UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep... 38 0.17
UniRef50_A7SV94 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.17
UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7; Pla... 38 0.17
UniRef50_A4HMS6 Cluster: Putative uncharacterized protein; n=3; ... 38 0.17
UniRef50_Q4WC94 Cluster: Nucleic acid-binding protein; n=2; Tric... 38 0.17
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.23
UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 ... 38 0.23
UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 38 0.23
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 38 0.30
UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole gen... 37 0.40
UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; ... 37 0.40
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 37 0.40
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.40
UniRef50_A7D716 Cluster: Aminotransferase class-III; n=1; Haloru... 37 0.40
UniRef50_Q9P3U1 Cluster: RNA-binding protein involved in export ... 37 0.53
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 36 0.70
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 36 0.70
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.70
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 36 0.70
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 36 0.70
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 36 0.92
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 36 0.92
UniRef50_A7SMA3 Cluster: Predicted protein; n=3; Nematostella ve... 36 0.92
UniRef50_Q6CBR2 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.92
UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit, ... 36 0.92
UniRef50_Q5BD63 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_A6QZK0 Cluster: Predicted protein; n=1; Ajellomyces cap... 36 0.92
UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_UPI0000499D3C Cluster: RNA-binding protein; n=1; Entamo... 36 1.2
UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:... 36 1.2
UniRef50_Q01CD9 Cluster: CwfJ / zinc finger; n=2; Ostreococcus|R... 36 1.2
UniRef50_A2Y1R0 Cluster: Putative uncharacterized protein; n=7; ... 36 1.2
UniRef50_O97318 Cluster: RNA-binding protein, putative; n=2; Pla... 36 1.2
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_O04432 Cluster: Glycine-rich protein; n=1; Oryza sativa... 32 1.6
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 35 1.6
UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm... 35 1.6
UniRef50_Q11AK7 Cluster: ParB-like partition proteins; n=1; Meso... 35 1.6
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 35 1.6
UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv - Ho... 35 1.6
UniRef50_A7AW01 Cluster: RNA recognition motif domain containing... 35 1.6
UniRef50_A4HV49 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A6R4B0 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 1.6
UniRef50_A2QMH2 Cluster: Contig An07c0030, complete genome. prec... 35 1.6
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 35 1.6
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 1.6
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 35 2.1
UniRef50_Q83D11 Cluster: RNA-binding protein; n=3; Coxiella burn... 35 2.1
UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,... 35 2.1
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 35 2.1
UniRef50_Q7SFZ5 Cluster: Putative uncharacterized protein NCU030... 35 2.1
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 35 2.1
UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8... 34 2.8
UniRef50_Q01Q04 Cluster: RNP-1 like RNA-binding protein; n=1; So... 34 2.8
UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere bin... 34 2.8
UniRef50_Q8IHX4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try... 34 2.8
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 34 2.8
UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 34 2.8
UniRef50_A1SF55 Cluster: Phosphate ABC transporter, periplasmic ... 34 3.7
UniRef50_Q8RWN5 Cluster: RNA-binding protein-like; n=3; Arabidop... 34 3.7
UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole geno... 34 3.7
UniRef50_Q86NL1 Cluster: RE27227p; n=5; Endopterygota|Rep: RE272... 34 3.7
UniRef50_A7RK53 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.7
UniRef50_A2E957 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A6RQM3 Cluster: Putative uncharacterized protein; n=2; ... 34 3.7
UniRef50_A5DYN8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A3LV28 Cluster: Predicted protein; n=2; Saccharomycetal... 34 3.7
UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2; ... 34 3.7
UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34; Euteleosto... 34 3.7
UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid CG16... 33 4.9
UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA bindin... 33 4.9
UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A0VLS8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;... 33 4.9
UniRef50_A3BWU4 Cluster: Putative uncharacterized protein; n=3; ... 33 4.9
UniRef50_A2YQN8 Cluster: Putative uncharacterized protein; n=4; ... 33 4.9
UniRef50_Q6BRG5 Cluster: Similar to CA0922|IPF12991 Candida albi... 33 4.9
UniRef50_Q2HG12 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 33 4.9
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 33 4.9
UniRef50_A6S537 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_UPI00006A089A Cluster: CTD-binding SR-like protein rA9;... 33 6.5
UniRef50_Q7XI13 Cluster: Glycine-rich RNA-binding protein-like; ... 33 6.5
UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|R... 33 6.5
UniRef50_O04319 Cluster: Poly(A)-binding protein isolog (Poly(A)... 33 6.5
UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium... 33 6.5
UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n... 33 6.5
UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid) pr... 33 6.5
UniRef50_A2GKC7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A2DHF2 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_Q6C5Y5 Cluster: Yarrowia lipolytica chromosome E of str... 33 6.5
UniRef50_A4QRR2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding prot... 33 6.5
UniRef50_UPI000051A0F5 Cluster: PREDICTED: similar to Cleavage s... 33 8.6
UniRef50_Q4QRG7 Cluster: Zgc:113884; n=5; Danio rerio|Rep: Zgc:1... 33 8.6
UniRef50_O25501 Cluster: Ss-DNA binding protein 12RNP2; n=4; Hel... 33 8.6
UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas m... 33 8.6
UniRef50_A0TAE1 Cluster: Putative uncharacterized protein precur... 33 8.6
UniRef50_A0HBM8 Cluster: RNA-binding region RNP-1; n=1; Comamona... 33 8.6
UniRef50_A4S2D6 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 8.6
UniRef50_Q8SRD9 Cluster: POLYADENYLATE BINDING PROTEIN 2; n=1; E... 33 8.6
UniRef50_Q4WNU1 Cluster: Integral ER membrane protein Scs2, puta... 33 8.6
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_A1CFG8 Cluster: Pre-mRNA splicing factor (Prp24), putat... 33 8.6
UniRef50_A1CDR4 Cluster: Ribonucleoprotein, putative; n=1; Asper... 33 8.6
UniRef50_Q969S3 Cluster: Zinc finger protein 622; n=24; Euteleos... 33 8.6
UniRef50_Q5UQ46 Cluster: Putative ATP-dependent RNA helicase L39... 33 8.6
UniRef50_P36629 Cluster: Splicing factor U2AF 59 kDa subunit; n=... 33 8.6
>UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to
ENSANGP00000003404; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000003404 - Nasonia
vitripennis
Length = 708
Score = 222 bits (543), Expect = 6e-57
Identities = 115/184 (62%), Positives = 136/184 (73%), Gaps = 8/184 (4%)
Frame = +3
Query: 27 MADGDVDIDLYADDIESDFNR-QDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHP 203
MADGD IDLYADD+E DF + Q EF G+ VDLYDDVI+A E G ++
Sbjct: 1 MADGD--IDLYADDLEQDFAQVQGEFTGDGVDLYDDVIAAAPGNNERGTSESSERGDRDR 58
Query: 204 P---EETNGNASYH---GPVHGHH-GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDV 362
EETNGNA YH + + GRR QLYVGNLTWW +DQDIA+A++++GV DF +V
Sbjct: 59 ETSNEETNGNAPYHQLGNNIQPNQIGRRHQLYVGNLTWWTSDQDIADAVANIGVPDFIEV 118
Query: 363 KFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSK 542
KFFENRANG+SKGFCVISLGS+QS+RM MERL KKE+HGQHP VT P+KQALNQFESQ K
Sbjct: 119 KFFENRANGRSKGFCVISLGSEQSMRMCMERLPKKELHGQHPQVTYPSKQALNQFESQCK 178
Query: 543 TRST 554
+R T
Sbjct: 179 SRPT 182
>UniRef50_Q9VSH4 Cluster: CG7185-PA; n=4; Endopterygota|Rep:
CG7185-PA - Drosophila melanogaster (Fruit fly)
Length = 652
Score = 197 bits (481), Expect = 2e-49
Identities = 104/184 (56%), Positives = 125/184 (67%), Gaps = 14/184 (7%)
Frame = +3
Query: 39 DVDIDLYADDIESDF--NRQDEFAGENVDLYDDV--ISAPASKPEDGDGPP----IIAPN 194
DV +DLYA+D++ DF QDEF G+ VDLYDD+ + A+ G G P P
Sbjct: 3 DVVLDLYAEDLDKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGTPSADGAAGPG 62
Query: 195 QHPPEETNG---NASYH---GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQ 356
P E N N YH G + RR+QLYVGNLTWW TDQDIAN++ D+GVSD Q
Sbjct: 63 SGEPGERNSGGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQ 122
Query: 357 DVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQ 536
+VKFFENRANGQSKGF VISLGS+ S+R V+++L KKE+HGQ PVVT P+KQAL QFES
Sbjct: 123 EVKFFENRANGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESL 182
Query: 537 SKTR 548
KTR
Sbjct: 183 QKTR 186
>UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificity
factor subunit 6; n=26; Euteleostomi|Rep: Cleavage and
polyadenylation specificity factor subunit 6 - Homo
sapiens (Human)
Length = 551
Score = 164 bits (399), Expect = 2e-39
Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
Frame = +3
Query: 27 MADGDVDIDLYADDIESDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPN 194
MADG ID+YAD + +FN++ E+ G + +DLYDDVIS A+ PED D + P
Sbjct: 1 MADGVDHIDIYAD-VGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPT 59
Query: 195 QHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFE 374
+ G + V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFE
Sbjct: 60 VG---DDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFE 116
Query: 375 NRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSK 542
NRANGQSKGF ++ +GS+ S + +M+ L K+E+HGQ+PVVT KQ L+QFE QS+
Sbjct: 117 NRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>UniRef50_A7SHB1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 502
Score = 132 bits (318), Expect = 1e-29
Identities = 82/199 (41%), Positives = 116/199 (58%), Gaps = 24/199 (12%)
Frame = +3
Query: 27 MADGDVDIDLYA--DDIESDFNRQDEFAGENVDLYDDVISAPASKP-EDGDGPPIIAPN- 194
MA DIDLYA D+++ + N ++ + DLYDD ++ A + ED I++ +
Sbjct: 1 MATDAADIDLYAGVDELDHEMNHHEQ---PSDDLYDDTLTTSAEQQAEDEALQGIVSYSG 57
Query: 195 ---QHPPEETNG---NASY--HGPVHGHHG------------RRFQLYVGNLTWWATDQD 314
Q P E ++G N Y + VH R LYVGNLTWW TDQ
Sbjct: 58 DLVQPPTEASSGPGSNYEYKSYTTVHPKSAASLAAQSSYERPRGKPLYVGNLTWWTTDQQ 117
Query: 315 IANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVV 494
+ A+ + GV+D ++KFF+NR NGQSKGF +I LGSD+S+ MV ERL K +I GQ+PVV
Sbjct: 118 LTEALQECGVTDLINIKFFDNRTNGQSKGFAMIELGSDKSIEMVTERLPKFDIEGQNPVV 177
Query: 495 TLPTKQALNQFESQSKTRS 551
T TKQ L++FE+Q + ++
Sbjct: 178 TPATKQHLHEFEAQHRAKA 196
>UniRef50_Q8N684 Cluster: Cleavage and polyadenylation specificity
factor subunit 7; n=23; Tetrapoda|Rep: Cleavage and
polyadenylation specificity factor subunit 7 - Homo
sapiens (Human)
Length = 471
Score = 123 bits (296), Expect = 5e-27
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 4/178 (2%)
Frame = +3
Query: 27 MADGDVDIDLYADDIESDFNRQDEFAG-ENVDLYDDVISAPASKPEDGDG---PPIIAPN 194
M++G ID+YAD+ +FN+ EF + +DLYDDV++A + +D PP
Sbjct: 1 MSEGVDLIDIYADE---EFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQ 57
Query: 195 QHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFE 374
+ P+ N + G RR +YVG+ +WW TDQ + I +GV D ++KF E
Sbjct: 58 EPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAE 117
Query: 375 NRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSKTR 548
NRANGQSKG+ + + S+ SV ++E L K ++G+ V T+Q L+QFE+Q++ R
Sbjct: 118 NRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
>UniRef50_Q18937 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 489
Score = 98.3 bits (234), Expect = 2e-19
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Frame = +3
Query: 117 DLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTW 296
DLYD+ I AP + E P+ T G + P GR++ YVGNL W
Sbjct: 39 DLYDEAI-APTNSTESAK--PVSPTITTVTAPTAGIGAK--PATSSEGRKYCCYVGNLLW 93
Query: 297 WATDQDIANAISDVGV--SDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKE 470
+ TD D+ A+ G+ S F D+KFFENR NGQSKG+ ++ L SD +V+ ME L K
Sbjct: 94 YTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTMEILPTKT 153
Query: 471 IHGQHPVVTL--PTKQA-LNQFESQSKTR 548
IHGQ P V T QA L +++++TR
Sbjct: 154 IHGQSPTVLSYNKTNQAKLEDAQAKNQTR 182
>UniRef50_UPI000065CB8D Cluster: Homolog of Brachydanio rerio "Cpsf6
protein.; n=1; Takifugu rubripes|Rep: Homolog of
Brachydanio rerio "Cpsf6 protein. - Takifugu rubripes
Length = 237
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +3
Query: 297 WATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIH 476
W +D D+ +GV D D+KF ENR NGQS+GF +S+ S++S+++++E++ +H
Sbjct: 30 WTSDSDLVCLAQRLGVKDVTDIKFAENRVNGQSRGFAEMSVTSEESLKILLEKVPDCILH 89
Query: 477 GQHPVVTLPTKQALNQFESQSKTR 548
G+ T Q L+ FE ++ R
Sbjct: 90 GETIDCRFATLQNLSIFEEKASQR 113
>UniRef50_Q4P6J4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 374
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVS-DFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+Y+G+L WW+TD++I S VGV+ D+ F E++ NG+SKG + S+ R +
Sbjct: 118 VYIGDLNWWSTDEEIRQIASSVGVTLSLNDITFSEHKVNGKSKGVAYVETESEADARKIK 177
Query: 450 ERLSKKEIHGQHPVVTLPTKQALNQFESQSK 542
+ + H + VTL T N F + K
Sbjct: 178 TWFEENDFHFKRANVTLTTSANGNPFRTLPK 208
>UniRef50_Q54RW5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 952
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+ L WW TDQ + N + G +K FEN NG+SKG+ + + ++
Sbjct: 165 LYISGLEWWTTDQQLENVFLEFG--KIVTLKIFENENNGKSKGYAFVEFEHIEQAQLAKS 222
Query: 453 RLSKKEIHGQHPVVTLPTKQ 512
+ KKEI+G+ + L ++Q
Sbjct: 223 KTEKKEINGKEMTIRLLSQQ 242
>UniRef50_A6RC85 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 417
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 147 ASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANA 326
A+ P+ + P A Q PP++ H L+V +L WW TD DI
Sbjct: 80 AATPQPSNPPQPQAQPQAPPQQGVKRKESHDNQAADPSATTALFVSDLYWWTTDDDIRGW 139
Query: 327 ISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERL 458
++ GV D +DV F E++ NG+SKG + S Q+ ++
Sbjct: 140 VNQAGVEDELKDVTFSEHKVNGKSKGQAFVEFRSSQAATATKHKI 184
>UniRef50_Q00Y64 Cluster: Hydroxymethylpyrimidine kinase; n=3;
Ostreococcus|Rep: Hydroxymethylpyrimidine kinase -
Ostreococcus tauri
Length = 669
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
GR +YV +LTWW TD ++ +++ G + + FF ++A G+SKG C + + +
Sbjct: 154 GRPTAVYVASLTWWTTDAELEGILAEFG--RVKSLTFFADKATGKSKGCCAVEFTTSDAA 211
Query: 438 RMVMERLSKKEIHGQHPVVT 497
E+L ++I+G+ VVT
Sbjct: 212 AACKEKLHGRQINGKACVVT 231
>UniRef50_A7P459 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 647
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L+VG L WW TD ++ + +S G +++KFF+ RA+G+SKG+C + + E
Sbjct: 231 LFVGELHWWTTDAELESVLSQYG--RVKEIKFFDERASGKSKGYCQVEFYDASAAAACKE 288
Query: 453 RLSKKEIHGQHPVVTLPTKQALNQ 524
++ +G+ VV + Q L Q
Sbjct: 289 GMNGYIFNGRACVVAFASPQTLKQ 312
>UniRef50_Q9SAF2 Cluster: F3F19.21 protein; n=1; Arabidopsis
thaliana|Rep: F3F19.21 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 573
Score = 56.4 bits (130), Expect = 6e-07
Identities = 26/84 (30%), Positives = 45/84 (53%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L+VG L WW TD +I + +S G +++KFF+ R +G+SKG+C + + E
Sbjct: 204 LFVGELHWWTTDAEIESVLSQYG--RVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKE 261
Query: 453 RLSKKEIHGQHPVVTLPTKQALNQ 524
++ +G+ VV + + L Q
Sbjct: 262 GMNGFIFNGKACVVAFASPETLKQ 285
>UniRef50_Q651Z0 Cluster: RNA-binding protein-like; n=4; Oryza
sativa|Rep: RNA-binding protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 604
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L+VG L WW TD D+ +S G ++V+FF+ +A+G+SKG+C + + E
Sbjct: 187 LFVGELHWWTTDADLEAELSKYG--QVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKE 244
Query: 453 RLSKKEIHGQHPVVTLPTKQALNQF-ESQSKTRST 554
++ +G+ VV + + + E+Q K + +
Sbjct: 245 GMNGHLFNGRPCVVAFASPHTVRRMGEAQVKNQQS 279
>UniRef50_Q012A5 Cluster: Ps16 protein; n=2; Ostreococcus|Rep: Ps16
protein - Ostreococcus tauri
Length = 1094
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL+W TD+ +A S+ D +D ++R G+S+GF +S+ +++ V
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF---DVRDASVMKDRETGRSRGFAFVSMNNEEDVERAS 971
Query: 450 ERLSKKEIHGQHPVVTLPTKQA 515
L+ +E+ G+ V+ QA
Sbjct: 972 AALNGREVDGRELRVSKAQAQA 993
Score = 40.3 bits (90), Expect = 0.043
Identities = 22/83 (26%), Positives = 44/83 (53%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
GRR +Y GNL+W D+ + S+ G +D + +R G+S+GF +++ +
Sbjct: 1014 GRR--VYFGNLSWGMDQYDLQDLCSEFG--SVEDSRLITDRDTGRSRGFGFVTMSNTTEA 1069
Query: 438 RMVMERLSKKEIHGQHPVVTLPT 506
V+ +L+ +++ G+ V + T
Sbjct: 1070 DEVVAQLNGQDVDGRVLRVNIAT 1092
>UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1;
Physcomitrella patens|Rep: Glycine-rich RNA-binding
protein - Physcomitrella patens (Moss)
Length = 155
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VG L W TD +I A S G + +VK +R G+S+GF ++ +DQ +
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFG--EVTEVKIICDRDTGRSRGFGFVTFATDQDAEAAL 100
Query: 450 ERLSKKEIHGQHPVVTLPTKQA 515
+ L +++ G+ V TKQ+
Sbjct: 101 QALDGRDLAGRTIRVNYATKQS 122
>UniRef50_A4RBZ1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 424
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQS 434
G + + L WW TD DI I + G + +D+ F E++ NG+SKG I L S Q+
Sbjct: 94 GATSAILISELQWWITDDDIRGWIREAGCEEELKDITFSEHKVNGKSKGQVYIELTSQQA 153
Query: 435 VRMVMERL 458
V RL
Sbjct: 154 ATAVKHRL 161
>UniRef50_Q9FM71 Cluster: Genomic DNA, chromosome 5, P1 clone:MDF20;
n=2; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
5, P1 clone:MDF20 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 710
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 237 GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 416
G G G L+VG+L WW TD ++ + G ++VKFF+ +A+G+SKG+C +
Sbjct: 224 GGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGYCQVE 281
Query: 417 LGSDQSVRMVMERLSKKEIHGQHPVV 494
+ + L+ +G+ VV
Sbjct: 282 FYDPVAASACKDALNGYPFNGRPCVV 307
>UniRef50_A1CJF8 Cluster: RRM domain protein; n=5;
Pezizomycotina|Rep: RRM domain protein - Aspergillus
clavatus
Length = 400
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
L + +L WW TD DI I++ G D +DV F E++ NG+SKG I + Q+
Sbjct: 114 LLISDLYWWTTDDDIRGWINEAGCEDELKDVTFSEHKVNGKSKGQAFIEFTTLQAATASK 173
Query: 450 ERLSKKEIHGQ 482
++ + GQ
Sbjct: 174 HKIENLNLAGQ 184
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/83 (28%), Positives = 47/83 (56%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++ +VG L W D+D+ S G D D K +R +G+S+GF ++ ++++R
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFG--DVIDSKIINDRESGRSRGFGFVTFKDEKAMRDA 63
Query: 447 MERLSKKEIHGQHPVVTLPTKQA 515
+E ++ KE+ G+ V+T+ Q+
Sbjct: 64 IEEMNGKELDGR--VITVNEAQS 84
>UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric
DNA-binding protein; n=3; Cryptosporidium|Rep:
Single-stranded G-strand telomeric DNA-binding protein -
Cryptosporidium hominis
Length = 198
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/77 (29%), Positives = 45/77 (58%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
Q++V NL W T +D+A A +++G + +V +FE +G+S+G I ++ +
Sbjct: 123 QVFVTNLAWKTTQEDLAKAFNEIGPLESCEVFYFE---DGRSRGIATIVFTDPNHAQLAV 179
Query: 450 ERLSKKEIHGQHPVVTL 500
E+L+ +EI G+ +V +
Sbjct: 180 EKLNDREIDGREILVRI 196
>UniRef50_UPI000023EAFE Cluster: hypothetical protein FG08870.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08870.1 - Gibberella zeae PH-1
Length = 929
Score = 48.4 bits (110), Expect = 2e-04
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 13/159 (8%)
Frame = +3
Query: 27 MADGDVDIDLYADDIESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPP 206
MA+ D +ID+Y D G N D + + + ++ D A + H
Sbjct: 1 MAEEDFEIDIYGDAGNEQQQDPQHHDGSNQDYHQEDHRRDSHDDQNMDEHH--AQDFHAR 58
Query: 207 EETNGNASYHGPVHG------HHGRRFQ------LYVGNLTWWATDQDIANAISDVGVSD 350
E + N G G GR L + L WW TD DI + G D
Sbjct: 59 ESYDSNHRASGSQQGTKRKQEEDGRPVDQTATTSLMISELNWWNTDDDIRGWAREAGCED 118
Query: 351 -FQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSK 464
+D+ F E++ NG+SKG I S Q+ R+ +
Sbjct: 119 EIKDITFSEHKVNGKSKGQAYIEFYSPQASTATKHRIEQ 157
>UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6;
Chlorobium/Pelodictyon group|Rep: RNA-binding region
RNP-1 - Pelodictyon luteolum (strain DSM 273)
(Chlorobium luteolum (strain DSM273))
Length = 99
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/79 (26%), Positives = 46/79 (58%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + + +Y+GNL + ++ D+ +A S G D ++ ++ +G+SKGF + + S
Sbjct: 3 HVYQDLKMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANI--IMDKFSGRSKGFGFVDMSS 60
Query: 426 DQSVRMVMERLSKKEIHGQ 482
D++ R +E ++++E G+
Sbjct: 61 DEAGRAAIEAMNEQEFKGR 79
>UniRef50_Q55XW5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 303
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 285 NLTWWATDQDIANAISDVGVS-DFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 461
+L WW +D+D+ + +GV + +D+ F E++ NG+SKG V++ S ++ V E L
Sbjct: 81 DLHWWTSDRDLVELCAQLGVVIEEKDILFMEHKVNGKSKGQAVLNCHSKENSLKVNEWLQ 140
Query: 462 KKEIHGQHPVVTLPTKQALNQFESQSK 542
G+ + TL N F ++
Sbjct: 141 CNAFQGKKVISTLAASIMGNPFHPNNQ 167
>UniRef50_A3QQP3 Cluster: Chloroplast single strand DNA binding
protein; n=1; Mesostigma viride|Rep: Chloroplast single
strand DNA binding protein - Mesostigma viride
Length = 299
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/120 (25%), Positives = 52/120 (43%)
Frame = +3
Query: 165 GDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGV 344
G+ P + +Y G G +LYVGNL W D + + + G
Sbjct: 170 GERAPRAERGERSERSERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGT 229
Query: 345 SDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQ 524
++ V +R +G+S+GF ++L + + M L +EI G+ V L TK + N+
Sbjct: 230 VNYARVVM--DRDSGRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLATKSSGNR 287
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL W D+ + A S G + + + +R +G+S+GF +++ S +
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFG--EVKAAEVVLDRESGRSRGFAFVTMASPDAAEKAR 148
Query: 450 ERLSKKEIHGQHPVVTLP 503
L E+ G+ V P
Sbjct: 149 RGLDGTELAGRAIRVNFP 166
>UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast
precursor; n=8; core eudicotyledons|Rep: 33 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 324
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/86 (29%), Positives = 48/86 (55%)
Frame = +3
Query: 225 ASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGF 404
++Y G V H +LYV NL+W T Q + +A +D F K +R++G+S+GF
Sbjct: 207 STYQGFVDSPH----KLYVANLSWALTSQGLRDAFAD--QPGFMSAKVIYDRSSGRSRGF 260
Query: 405 CVISLGSDQSVRMVMERLSKKEIHGQ 482
I+ S +++ ++ +++ E+ G+
Sbjct: 261 GFITFSSAEAMNSALDTMNEVELEGR 286
Score = 38.7 bits (86), Expect = 0.13
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL + T ++ ++ G +V+ +R +S+GF +++GS + + +
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGT--VANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 172
Query: 450 ERLSKKEIHGQHPVVTLPTKQALNQFESQS-KTRST 554
++ G+ V P + E S K RST
Sbjct: 173 RLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRST 208
>UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;
Magnoliophyta|Rep: Glycine rich RNA binding protein -
Oryza sativa (Rice)
Length = 194
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++ +VG L W D+ + A S G + + K +R G+S+GF ++ S+Q++R
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDA 65
Query: 447 MERLSKKEIHGQHPVV 494
+E ++ KE+ G++ V
Sbjct: 66 IEGMNGKELDGRNITV 81
>UniRef50_Q8SXG7 Cluster: RE72132p; n=7; Endopterygota|Rep: RE72132p
- Drosophila melanogaster (Fruit fly)
Length = 336
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/93 (27%), Positives = 44/93 (47%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
QL++G+L + T+ I A +G D V+ N+ G+ G+C ++ SD M
Sbjct: 7 QLWMGSLESYMTENFIIAAFRKMG-EDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAM 65
Query: 450 ERLSKKEIHGQHPVVTLPTKQALNQFESQSKTR 548
+L+ K I G +P+V A N ++ R
Sbjct: 66 HKLNGKPIPGTNPIVRFRLNSASNSYKLPGNER 98
>UniRef50_Q4WWS4 Cluster: RRM domain protein; n=4;
Pezizomycotina|Rep: RRM domain protein - Aspergillus
fumigatus (Sartorya fumigata)
Length = 396
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
L + +L WW TD DI I+ G D +DV F E++ NG+SKG + + Q+
Sbjct: 114 LLISDLYWWTTDDDIRGWINAAGCEDELKDVTFSEHKVNGKSKGQAFVEFTTLQAATAAK 173
Query: 450 ERLSKKEIHGQ 482
++ + Q
Sbjct: 174 HQIENLNVSSQ 184
>UniRef50_Q10KP0 Cluster: RNA recognition motif family protein,
expressed; n=9; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 265
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
G ++YVGNL+W + +AN S G + + K +R +G+S+GF ++ GS + V
Sbjct: 177 GEANRVYVGNLSWGVDNAALANLFS--GEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEV 234
Query: 438 RMVMERLSKKEIHGQHPVVTL 500
+ L ++ G+ VT+
Sbjct: 235 ENAVSNLDGADMDGRQIRVTV 255
>UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardia
theta|Rep: RNA recognition motif 1 - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 46.0 bits (104), Expect = 9e-04
Identities = 29/107 (27%), Positives = 52/107 (48%)
Frame = +3
Query: 219 GNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSK 398
G + GP G +L+VG L+W DQ + A + G + K +R +G+S+
Sbjct: 73 GRGAPRGPPDGPIDP-LKLFVGGLSWEVDDQQLMEAFQEFGNC---EAKVMVDRYSGRSR 128
Query: 399 GFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQS 539
GF ++ + S +E ++ +E+ G+ VT +Q + + SQS
Sbjct: 129 GFGFVTFSEEHSAAKAIEEMNGRELLGRQITVT-HARQKIYEQNSQS 174
>UniRef50_Q0V5E5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 412
Score = 46.0 bits (104), Expect = 9e-04
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQ- 431
G L + ++ WW +++DI + G D +V F E++ NG+SKG + L S Q
Sbjct: 117 GATAALMINDVNWWVSEEDIRGWANQSGCEDELNEVTFNEHKVNGKSKGQVYVQLQSPQA 176
Query: 432 --SVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSK 542
+++ ++ L K + H + P Q N F++ K
Sbjct: 177 ATALKHQIDNLFKDQAHAKKPTAIFNPPQH-NPFKTLPK 214
>UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast
precursor; n=5; Arabidopsis thaliana|Rep: 29 kDa
ribonucleoprotein, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 342
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL+W D + N ++ G + + +R +G+SKGF ++L S Q V+ +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 315
Query: 450 ERLSKKEIHGQ 482
L+ ++ G+
Sbjct: 316 NSLNGADLDGR 326
>UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 -
Nicotiana sylvestris (Wood tobacco)
Length = 144
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/82 (25%), Positives = 45/82 (54%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VG L+W DQ + +A + G D D + +R +G+S+GF ++ D+ +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAI 96
Query: 450 ERLSKKEIHGQHPVVTLPTKQA 515
+ + +E+ G++ V + ++A
Sbjct: 97 KAMDGQELQGRNIRVRIAQERA 118
>UniRef50_Q9SVM8 Cluster: Glycine-rich RNA-binding protein 2,
mitochondrial precursor; n=14; Magnoliophyta|Rep:
Glycine-rich RNA-binding protein 2, mitochondrial
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 158
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 213 TNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 392
+NGN + +L++G L+W D + +A + G D D K +R G+
Sbjct: 17 SNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGR 74
Query: 393 SKGFCVISLGSDQSVRMVMERLSKKEIHGQH 485
S+GF ++ + + + + KE++G+H
Sbjct: 75 SRGFGFVNFNDEGAATAAISEMDGKELNGRH 105
>UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding protein;
n=1; Arabidopsis thaliana|Rep: Putative glycine-rich
RNA-binding protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 185
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++ +VG L W +Q I ++ G + D K +R G+SKGF ++ + S+R
Sbjct: 44 YRCFVGGLAWATDEQSIERCFNEFG--EVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTA 101
Query: 447 MERLSKKEIHGQH 485
++R++ +E+ G++
Sbjct: 102 IDRMNGQELDGRN 114
>UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 192
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL+W TD +A+A S G D ++R G+S+GF ++ + +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSTYG--QLTDYIVMKDRETGRSRGFGFVTFATQAEADAAI 61
Query: 450 ERLSKKEIHGQ 482
L+++E+ G+
Sbjct: 62 AALNEQELDGR 72
>UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 534
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L++G+L +A + +A+A + +G S VK +NR G G+C + G + + VM
Sbjct: 4 LWMGDLDQFADEAFVASAFAAMGES-VASVKMIKNRITGGPAGYCFVDFGDTGTAQKVMS 62
Query: 453 RLSKKEIHGQHPV 491
+L+ I G +P+
Sbjct: 63 KLNGLPIPGSNPI 75
>UniRef50_Q5EUH9 Cluster: Putative uncharacterized protein; n=1;
Gemmata sp. Wa1-1|Rep: Putative uncharacterized protein
- Gemmata sp. Wa1-1
Length = 122
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL+W TD + + + G + +R G+SKGF + +G+DQ + +
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYG--SVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAI 98
Query: 450 ERLSKKEIHGQ 482
+ + I G+
Sbjct: 99 TGMHGQVIEGR 109
>UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 632
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/111 (19%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +3
Query: 195 QHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFE 374
++P E G PV G+ +++GN+ ++D+ + ++G+ V
Sbjct: 391 KYPKIEICGKQCGTAPVEGND----TIFLGNIDKNWKNEDVVKLLQEIGIDKIDKVTVMV 446
Query: 375 NRAN-GQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQ 524
+ +N +++GF + L +++ ++ ++L KK++ G+H + + + LN+
Sbjct: 447 DPSNIERNRGFAFLELETNKDAQLAYKKLQKKDVFGKHQNIKVAWAEPLNE 497
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 261 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 440
R+ ++++G L A ++DI +VG + +V+ N G++KG+ + +
Sbjct: 329 RKTEIFIGGLDKSAREEDIRKVFEEVG--EVLEVRLMMNSKTGKNKGYAFLRFALASDAK 386
Query: 441 MVMERLSKKEIHGQ 482
+ + K EI G+
Sbjct: 387 RALAKYPKIEICGK 400
>UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast
precursor; n=10; core eudicotyledons|Rep: 31 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
plumbaginifolia (Leadwort-leaved tobacco)
Length = 292
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +3
Query: 216 NGNASYHGPVHGHH-GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 392
+GN+S+ G G ++YVGNL+W D + S+ G + D K +R +G+
Sbjct: 190 DGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQG--NVVDAKVVYDRDSGR 247
Query: 393 SKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQF 527
S+GF ++ S + V ++ L+ ++ G+ V+ ++ QF
Sbjct: 248 SRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292
>UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 935
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/71 (32%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVG-VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++V NL + AT++++ A+ + + F+ VK F+ G+SKGFC +SL S+++V +
Sbjct: 691 VFVSNLDYTATEEEVREALKPIWPIISFRMVKDFK----GRSKGFCYVSLSSEEAVNEAL 746
Query: 450 ERLSKKEIHGQ 482
+L + I+G+
Sbjct: 747 -KLDRTRINGR 756
>UniRef50_Q01IS3 Cluster: OSIGBa0128P10.1 protein; n=4; Oryza
sativa|Rep: OSIGBa0128P10.1 protein - Oryza sativa
(Rice)
Length = 488
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+++G L +W TD ++ A++ G + FF ++ G+S+GFC S +
Sbjct: 130 VFIGELPYWTTDAEVEGALAPHGA--LHGLHFFTDKLTGKSRGFCRADFLSPDAAASAAA 187
Query: 453 RLSKKEIHGQHPVVTL 500
L + G+H V +L
Sbjct: 188 ALHGRTFDGRHCVASL 203
>UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 252
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 276 YVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMER 455
YVGNL W T+ D+ + + +S ++F N+ G S+GFC + D+S+ +
Sbjct: 176 YVGNLKWDVTETDLRDFFKSLKISS---IRFAINKRTGDSRGFCHVDFEDDESLEKAV-G 231
Query: 456 LSKKEIHGQ 482
+++ E+ G+
Sbjct: 232 MNQSELRGR 240
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL++ TD+D+ A + G + K ++ + +SKGF + + S + ++
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYG--EVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIK 77
Query: 453 RLSKKEIHGQHPVV 494
+ +I G+ VV
Sbjct: 78 EMHDSDIKGRQVVV 91
>UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1;
Treponema pallidum|Rep: RNA-binding protein, putative -
Treponema pallidum
Length = 105
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL + T+ +A+ S G + V +++ +SKGF + + S +S +V+
Sbjct: 20 KIYVGNLNYATTEAGLASLFSQFG--EVLSVAVIKDKLTQRSKGFGFVEMESAESAELVI 77
Query: 450 ERLSKKEIHGQ 482
L++KE G+
Sbjct: 78 NELNEKEFEGR 88
>UniRef50_A1C467 Cluster: RNA binding domain protein; n=1;
Aspergillus clavatus|Rep: RNA binding domain protein -
Aspergillus clavatus
Length = 306
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GNL++ TD+D+ + DV S+ DV+ +R GQ +GF +S + +E
Sbjct: 215 LYIGNLSFEMTDRDLNDLFKDV--SNVIDVRVSIDRRTGQPRGFAHAEFIDAESAQKGLE 272
Query: 453 RLSKKEIHGQ 482
LS+K +G+
Sbjct: 273 ILSRKSPYGR 282
>UniRef50_Q6C9S9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 439
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
LY+ NL WW ++ + D G D + V F E++ NG+SKG + S + R V
Sbjct: 142 LYILNLDWWTNEEIVRGWAVDCGFEDSVETVVFDEHKPNGKSKGVVYMQFASLAAARAVK 201
Query: 450 ERLSKKEIHGQHP 488
+ + + Q P
Sbjct: 202 QHVEQLSPRTQSP 214
>UniRef50_P82277 Cluster: Plastid-specific 30S ribosomal protein 2,
chloroplast precursor; n=7; Magnoliophyta|Rep:
Plastid-specific 30S ribosomal protein 2, chloroplast
precursor - Spinacia oleracea (Spinach)
Length = 260
Score = 42.7 bits (96), Expect = 0.008
Identities = 26/112 (23%), Positives = 56/112 (50%)
Frame = +3
Query: 174 PPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDF 353
PP++ EET+ +++ G RR LYVGN+ + ++ + + G +
Sbjct: 55 PPLLKVRAVVTEETSSSSTASSSSDGEGARR--LYVGNIPRNLNNDELRTIVEEHGAIEI 112
Query: 354 QDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTK 509
+V + ++ +G+S+ F +++ + + V+E+L+ EI G+ V + K
Sbjct: 113 AEVMY--DKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEK 162
>UniRef50_Q67JJ7 Cluster: Glycine-rich RNA-binding protein; n=4;
Bacteria|Rep: Glycine-rich RNA-binding protein -
Symbiobacterium thermophilum
Length = 95
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/70 (31%), Positives = 40/70 (57%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY GNL W AT +D+ NA+S + + +R G+S+GF + + D++ ++V++
Sbjct: 5 LYFGNLPWAATSEDLHNAVSQ--YCEVISARIVTDRETGRSRGFGFVEV-PDEAAQLVID 61
Query: 453 RLSKKEIHGQ 482
L+ E G+
Sbjct: 62 ALNGAEWAGR 71
>UniRef50_O04240 Cluster: RNA- or ssDNA-binding protein; n=2;
Papilionoideae|Rep: RNA- or ssDNA-binding protein -
Vicia faba var. minor
Length = 289
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/107 (23%), Positives = 47/107 (43%)
Frame = +3
Query: 162 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 341
D + ++ + EE G + R +LY GNL + +A I + G
Sbjct: 82 DDEEKVVVEEEEKENEEGQGEKENGEEIVAEEDTRTKLYFGNLPYSVDSAKLAGLIEEYG 141
Query: 342 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQ 482
++ +V + +R G+S+GF ++ + + V+E L KE G+
Sbjct: 142 SAELVEVLY--DRDTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGR 186
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + + +++ NL + + DIA S G + DV ++ G+SKGFC ++
Sbjct: 22 HDEYNKSSYIFIANLNYAMNEGDIAIVFSQYG--EIVDVHLVRDKITGKSKGFCFLAYED 79
Query: 426 DQSVRMVMERLSKKEIHGQ 482
+S + ++ + EI G+
Sbjct: 80 QRSTILAVDNFNHAEICGR 98
>UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 41.9 bits (94), Expect = 0.014
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LY+G+L + TD+ + A G D K +R + +SKGF ++ D+ + +
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGT--VTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAI 60
Query: 450 ERLSKKEIHGQ 482
E ++++E+ G+
Sbjct: 61 EEMNEQELEGR 71
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL++ T +DI+N ++ G + V +R G+ +GF + +GSD +E
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYG--SVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60
Query: 453 RLSKKEIHGQ 482
L E G+
Sbjct: 61 GLDGAEWMGR 70
>UniRef50_A7F6E1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 407
Score = 40.7 bits (91), Expect = 0.032
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 153 KPEDGDGPPII-APNQHPPEE--TNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIAN 323
K D G ++ P Q P ++ S P+ G L + L WW TD D+
Sbjct: 76 KSTDESGQDLLNIPKQAPQQQGVKRKEGSDDRPID--QGATTALLISELHWWNTDDDVRG 133
Query: 324 AISDVGVSD-FQDVKFFENRANGQSKG 401
I+ V D +++ F E++ NG+SKG
Sbjct: 134 WINQAQVEDELKEMTFSEHKVNGKSKG 160
>UniRef50_Q6C1T7 Cluster: Similar to DEHA0A13563g Debaryomyces
hansenii IPF 7368.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0A13563g Debaryomyces hansenii IPF 7368.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 422
Score = 37.5 bits (83), Expect(2) = 0.036
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VG L+W D + +D G + +A G+SKGF + S + +E
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAGAVS---ARVITEKATGRSKGFGYVDFASGADAQKCVE 226
Query: 453 RLSKKEIHGQ 482
KEI G+
Sbjct: 227 EFQDKEIDGR 236
Score = 22.2 bits (45), Expect(2) = 0.036
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 72 ESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGP 176
+SD + DE E ++ + + PA++PE P
Sbjct: 131 DSDSDSDDEKTEEKTEVKAETKAEPAAEPEAAAEP 165
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL++ AT+ D+ S+ G + V+ +R G+ +GF + + SD+ +E
Sbjct: 3 IYVGNLSYQATEDDVLTVFSEYGT--VKRVQLPTDRETGRMRGFGFVEMSSDKEEDAAIE 60
Query: 453 RLSKKEIHGQ 482
L E G+
Sbjct: 61 ALDGAEWMGR 70
>UniRef50_A7NXI6 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 283
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LY GNL + +A I + G + +V + NR G+S+GF +++ S + V+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY--NRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 450 ERLSKKEIHGQ 482
E L E G+
Sbjct: 170 ENLDGSEYGGR 180
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/72 (20%), Positives = 35/72 (48%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++L+VGNL+W T + + + G + + + G+S+G+ + + +
Sbjct: 202 YKLFVGNLSWSVTSESLNQVFQEYG--NVIGARVLYDGETGRSRGYGFVCYSTKAEMDTA 259
Query: 447 MERLSKKEIHGQ 482
+E L+ E+ G+
Sbjct: 260 LESLNGVELEGR 271
>UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 183
Score = 40.3 bits (90), Expect = 0.043
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = +3
Query: 261 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 440
+ F+L+VGNL ATD+ +ANA VK + G++KG+ ++ S
Sbjct: 84 KHFRLFVGNLGTDATDELLANAFGK--YKTLSKVKVPMDNKTGKNKGYGFVAFESPDDYF 141
Query: 441 MVMERLSKKEIHGQHPVV-------TLPTKQALNQFESQSKTR 548
+ ++ K I GQHPV PTK+ + F++ K R
Sbjct: 142 QAFKDMNGKYI-GQHPVQLKRAETNIKPTKKKSDSFKNNRKGR 183
>UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA
gamma - Pisum sativum (Garden pea)
Length = 743
Score = 39.9 bits (89), Expect = 0.056
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Frame = +3
Query: 153 KPEDGDGPPIIAPNQHPPEETNGNAS---YHG----PVHGHHGRRFQLYVGNLTWWATDQ 311
+P G+GP N H P +G + G P H G +L+VG++ AT++
Sbjct: 46 RPMGGEGPGDFGFNNHQPPVMSGQKRGFPFSGRGASPDHFDGGNFAKLFVGSVPRTATEE 105
Query: 312 DIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPV 491
DI + G + +V ++R GQ +G C I + + + + +H QH
Sbjct: 106 DIRPLFEEHG--NVIEVALIKDRKTGQHQGCCFIKYATSEEADQAI-----RALHNQH-- 156
Query: 492 VTLP 503
TLP
Sbjct: 157 -TLP 159
>UniRef50_A0E3P7 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_77,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 318
Score = 39.9 bits (89), Expect = 0.056
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ---SKGFCVIS 416
H H + L+V NL+ TD ++ G ++ V E R+ G S+GF +
Sbjct: 111 HYQHLEKLCLHVSNLSKRVTDAELKETFEKYGQIEYAAV-CMEPRSKGPGKVSRGFGFVK 169
Query: 417 LGSDQSVRMVMERLSKKEIHG 479
+SV++ +E + KE+HG
Sbjct: 170 FAKKESVQIALEAMQDKELHG 190
>UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor; n=1;
Yarrowia lipolytica|Rep: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor -
Yarrowia lipolytica (Candida lipolytica)
Length = 621
Score = 39.9 bits (89), Expect = 0.056
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 261 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 440
R +LYVGN+ + T+ +I G +F D+ + G+SKG+C I + +
Sbjct: 444 RFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADL---QKEKTGKSKGYCFIQYVNPDDAK 500
Query: 441 MVMERLSKKEIHGQ 482
+E+++ E+ G+
Sbjct: 501 TALEKMNGFELAGR 514
>UniRef50_A2R8K5 Cluster: Contig An16c0230, complete genome; n=2;
Aspergillus|Rep: Contig An16c0230, complete genome -
Aspergillus niger
Length = 381
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GNL + TD+D+ D V + D++ +R GQ++GF S S + M
Sbjct: 288 LYIGNLPFEMTDRDLNELFKD--VQNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMA 345
Query: 453 RLSKKEIHGQ 482
L K +G+
Sbjct: 346 ILENKLPYGR 355
>UniRef50_Q03250 Cluster: Glycine-rich RNA-binding protein 7; n=16;
cellular organisms|Rep: Glycine-rich RNA-binding protein
7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 176
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/72 (23%), Positives = 40/72 (55%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++ +VG L W D+ + A + G D D K +R G+S+GF ++ +++++
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65
Query: 447 MERLSKKEIHGQ 482
+E ++ +++ G+
Sbjct: 66 IEGMNGQDLDGR 77
>UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular
organisms|Rep: RNA-binding protein - Gloeobacter
violaceus
Length = 123
Score = 39.5 bits (88), Expect = 0.075
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++VGNL + T+QDI A S+ G + VK +R G+ +GF + + ++ +++
Sbjct: 3 VFVGNLPFSVTEQDITEAFSEYGT--VKSVKIPTDRETGRPRGFAFVEMADEEEAKVI 58
>UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5;
Bacteroidetes/Chlorobi group|Rep: RNA-binding protein -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL + ++D+ + G + +R G+S+GF + + + R +E
Sbjct: 5 IYVGNLNYRVREEDLTGLLQQYGA--VTSARVITDRETGRSRGFGFVEMEDENDARRAIE 62
Query: 453 RLSKKEIHGQHPVV 494
L +E G+ +V
Sbjct: 63 ELFDQEFQGRKLIV 76
>UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gbp1
- Griffithsia japonica (Red alga)
Length = 156
Score = 39.5 bits (88), Expect = 0.075
Identities = 26/97 (26%), Positives = 48/97 (49%)
Frame = +3
Query: 192 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 371
+Q PP ++NG A G GH G + ++YVGNL+W Q + + + + G D + F
Sbjct: 4 DQPPPPQSNGAAPQTG---GHSGGK-RVYVGNLSWDTRWQGLKDHMREAG--DVVHAEVF 57
Query: 372 ENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQ 482
A+G+S G ++ + + + L+ + G+
Sbjct: 58 -TEASGRSAGCGIVEFENSEGAETAISTLNDTMLDGR 93
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 39.5 bits (88), Expect = 0.075
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VG L+W T++D+ N G +K ++ G S+GF +++ ++ S++ V+
Sbjct: 73 KLFVGGLSWETTEEDLKNYFETWGKVAHCVIKL--DKMTGNSRGFGFVTMDTEDSLKKVL 130
Query: 450 E----RLSKKEIHGQHPVVTLPTKQ 512
E RL K+I P PTK+
Sbjct: 131 EVPEHRLKNKKI---DPKPAKPTKE 152
>UniRef50_P40565 Cluster: U2 snRNP component IST3; n=5;
Saccharomycetales|Rep: U2 snRNP component IST3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 39.5 bits (88), Expect = 0.075
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +3
Query: 207 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 386
E +G S H H + +Y+GNL T+ DI S+ GV DV +
Sbjct: 11 ELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVP--VDVILSRDENT 68
Query: 387 GQSKGFCVISLGSDQSVRMVMERLSKKEIHGQ 482
G+S+GF + +S + ++ L+ +I G+
Sbjct: 69 GESQGFAYLKYEDQRSTILAVDNLNGFKIGGR 100
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 39.1 bits (87), Expect = 0.099
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL++ ++ D+ A S G DV +R G+ +GF ++ + + ++
Sbjct: 4 KLYVGNLSFNTSEADLRTAFSTCGT--LTDVFLATDRETGRPRGFAFVTFDTAEESQLAT 61
Query: 450 ERLSKKEIHGQ 482
E+L+ ++ G+
Sbjct: 62 EKLNGTDLGGR 72
>UniRef50_A2E2A9 Cluster: Eukaryotic translation initiation factor 3
subunit 10, putative; n=1; Trichomonas vaginalis G3|Rep:
Eukaryotic translation initiation factor 3 subunit 10,
putative - Trichomonas vaginalis G3
Length = 311
Score = 39.1 bits (87), Expect = 0.099
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 288 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 461
L WW TDQ I ++S +G +D+ F + NGQS G + + S+ V + + LS
Sbjct: 51 LDWWITDQQITESLSAIG--HVKDLYFKQFHTNGQSSGDVDVEIQSELPVEEINDILS 106
>UniRef50_Q7SET9 Cluster: Predicted protein; n=2; Sordariales|Rep:
Predicted protein - Neurospora crassa
Length = 300
Score = 39.1 bits (87), Expect = 0.099
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
GRR +Y+GNL + D+ + D G + ++ + + +G++ G+C I + +
Sbjct: 10 GRR--IYMGNLLYSVKPADVEGLLQDAGFTQYEKIHISVDPLSGRNPGYCFIEFTTREEA 67
Query: 438 RMVMERLSKKEIHGQ 482
+E L+ ++ G+
Sbjct: 68 ERALESLAGVDLCGR 82
>UniRef50_A5E562 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 510
Score = 39.1 bits (87), Expect = 0.099
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISD-VGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVR 440
++ YV NL W T+QD+ D + +D D+K +R GQ KG ++ + + +
Sbjct: 87 YKAYVNNLPWDITEQDVIRHFEDRMQANDIISDIKLPLDRETGQIKGVAYVTFTTRELLE 146
Query: 441 MVMERLSKKEIHGQHPVVTL-PTKQALNQFESQ 536
+ LS E +G+ V + P +Q ++F S+
Sbjct: 147 ESL-NLSMSEFNGRRMFVNVAPPQQGNDRFGSR 178
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/72 (27%), Positives = 42/72 (58%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGNL+W A ++D+ G + ++ +R +G+S+GF ++L +D + + +
Sbjct: 4 RLYVGNLSWNAKEEDLRTYFGKFG--EVEEASIALDRESGRSRGFGFVTLPADVA-KDAI 60
Query: 450 ERLSKKEIHGQH 485
E+ + E G++
Sbjct: 61 EKTNGAEFMGRN 72
>UniRef50_UPI0000499FA7 Cluster: RNA-binding protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 206
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/74 (24%), Positives = 40/74 (54%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GN+ + +T++D+ N I G + ++ G++KGF ++ + + +
Sbjct: 15 LYIGNIPYSSTEKDVKNFIQYDGCK----ITMVTDKNTGKTKGFAFVAFETHEQALEIKN 70
Query: 453 RLSKKEIHGQHPVV 494
+L KE+ G+ P++
Sbjct: 71 KLQGKELEGR-PII 83
>UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Probable nucleic
acid-binding protein - Plesiocystis pacifica SIR-1
Length = 155
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +3
Query: 249 GHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSD 428
G+ G +L+VG L+W + + VG D +R G S+GF +++ +
Sbjct: 70 GNSGPPCRLFVGGLSWDTESDSLRELFAKVGA--VVDAMIVTDRDTGDSRGFGFVTMANR 127
Query: 429 QSVRMVMERLSKKEIHGQHPVVTLPTKQ 512
+ M+ L E+ G+ + L T++
Sbjct: 128 KDATKAMKELGGTELDGRSIRIDLATER 155
>UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep:
T2K10.5 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 258
Score = 38.3 bits (85), Expect = 0.17
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LY GNL + +A I D + +V + NR GQS+GF +++ + + +++
Sbjct: 86 KLYFGNLPYNVDSATLAQIIQDFANPELVEVLY--NRDTGQSRGFAFVTMSNVEDCNIII 143
Query: 450 ERLSKKEIHGQHPVVTLPTKQALNQ 524
+ L E G+ V K N+
Sbjct: 144 DNLDGTEYLGRALKVNFADKPKPNK 168
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VGNL+W T + +A A + G D + + G+S+G+ + S + +
Sbjct: 178 KLFVGNLSWTVTSESLAGAFRECG--DVVGARVVFDGDTGRSRGYGFVCYSSKAEMETAL 235
Query: 450 ERLSKKEIHGQ 482
E L E+ G+
Sbjct: 236 ESLDGFELEGR 246
>UniRef50_A7SV94 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 81
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/75 (24%), Positives = 42/75 (56%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LY+GNL + + + +I A + GV + V ++ +G+S+GF + L + + +
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFGV---EKVDILRDKESGRSRGFGFVLLQTADQIAPAI 66
Query: 450 ERLSKKEIHGQHPVV 494
E++++ + G++ V
Sbjct: 67 EKMNQSSVGGRNITV 81
>UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 250
Score = 38.3 bits (85), Expect = 0.17
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +3
Query: 210 ETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANG 389
E N NAS H V + ++YVGNL W T + + G D V FE+ G
Sbjct: 2 EDNSNASVHSAVQQSPAKGCRVYVGNLPWKVTWPVLKTHMKKAG--DVVRVDIFED-TQG 58
Query: 390 QSKGFCVISLGSDQSVRMVMERLSKKEI 473
+SKG ++ + + + + L+ ++
Sbjct: 59 RSKGCGIVEYATYEEAQEAINSLNDSKL 86
>UniRef50_A4HMS6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 458
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+++GN+ + T++D+ N + G+ D + V+ +R G KGF + SV +E
Sbjct: 275 IFLGNVAYDTTEEDVWNFFQEHGIRDVKRVRLVRDRETGDCKGFGYVEFMHASSVHPAIE 334
Query: 453 RLSKK 467
K
Sbjct: 335 TRGDK 339
>UniRef50_Q4WC94 Cluster: Nucleic acid-binding protein; n=2;
Trichocomaceae|Rep: Nucleic acid-binding protein -
Aspergillus fumigatus (Sartorya fumigata)
Length = 324
Score = 38.3 bits (85), Expect = 0.17
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GNL++ TD+D+ D +++ DV+ +R GQ +GF +S + E
Sbjct: 234 LYLGNLSFEMTDRDLNELFRD--INNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFE 291
Query: 453 RLSKKEIHGQ 482
LS K +G+
Sbjct: 292 ILSGKAPYGR 301
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
R +YVGNL + T +D+ N + GV + D+ +NR G S+GF + S ++ +
Sbjct: 143 RQTVYVGNLFYDVTAEDLKNHMQQFGVVERVDL-ITDNR--GLSRGFAYVHFDSIEAAKS 199
Query: 444 VMERLSKKEIHGQ 482
+E + + G+
Sbjct: 200 CVEAMHLQIFEGR 212
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 37.9 bits (84), Expect = 0.23
Identities = 20/91 (21%), Positives = 46/91 (50%)
Frame = +3
Query: 276 YVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMER 455
Y GNL W +++ + + + GV+ Q ++ G+SKG+ ++ + + + +E+
Sbjct: 115 YFGNLAWETSEETLTSHCASFGVNVVQCE--VARQSGGRSKGWALVDFATPEEAQNAIEQ 172
Query: 456 LSKKEIHGQHPVVTLPTKQALNQFESQSKTR 548
+ EI G+ +V + + Q ++ +TR
Sbjct: 173 MHNSEIQGRSIIVRV-ERPGAGQKSARVETR 202
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
G +LYVGN+ W T +D+ ++ G D+ G+S+G+ ++ S+
Sbjct: 6 GSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDI---PTGRQGRSRGYGLVEFNSEAEA 62
Query: 438 RMVMERL 458
+ + R+
Sbjct: 63 QAAVTRM 69
>UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 -
Neurospora crassa
Length = 575
Score = 37.9 bits (84), Expect = 0.23
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 249 GHHGRRF---QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISL 419
GHH +LYVGN+ + T+QD+ N G +F + + NG+S+G+ +
Sbjct: 272 GHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFVQF 328
Query: 420 GSDQSVRMVMERLSKKEIHGQ 482
R +E+++ ++ G+
Sbjct: 329 RDAGQAREALEKMNGFDLAGR 349
>UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 334
Score = 37.9 bits (84), Expect = 0.23
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GN+ + TD+D+ D V + DV+ +R G+++GF +S R
Sbjct: 236 LYIGNIPFEMTDRDLNELFKD--VDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFT 293
Query: 453 RLSKKEIHGQ 482
LS K +G+
Sbjct: 294 LLSTKTPYGR 303
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +3
Query: 108 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 287
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 288 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 37.5 bits (83), Expect = 0.30
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 261 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 440
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVVT 191
Query: 441 MVMERLSKKEIHGQHPVVTLPTKQALNQ 524
++ + K++I G+ V T + NQ
Sbjct: 192 DLL-KTPKQKIAGKEVDVKRATPKPENQ 218
>UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein
HRP1; n=1; Aspergillus fumigatus|Rep: Heterogeneous
nuclear ribonucleoprotein HRP1 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 608
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++++G L W TDQ + + S G + Q+ + A G+S+GF ++ ++V VM
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFG--EVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 163
>UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 269
Score = 37.1 bits (82), Expect = 0.40
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++LYVGNL W +D+ N S G + +R G+ + + +S S
Sbjct: 188 YKLYVGNLAWAIKPEDLRNHFSQFGT--VVSARVVHDRKAGKHRAYGFLSFSSAAECEAA 245
Query: 447 MERLSKKEIHGQHPVVTLPTKQ 512
M L+ KE G+ VV+ K+
Sbjct: 246 MS-LNGKEFRGRSLVVSAGMKR 266
>UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 1035
Score = 37.1 bits (82), Expect = 0.40
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 PIIAPNQHPPEETNGNASYHG----PVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG- 341
PI++ + HPP+ + PV + R +Y+G++ W T+ + + S G
Sbjct: 737 PILSQSHHPPQHPTPDVPKPNESAPPVPINEASR--IYIGSINWNVTEDQVRSIFSQFGR 794
Query: 342 -VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQAL 518
+S F +N G+ KGF + +S + ++ E+ G+ V PTK +
Sbjct: 795 VISCF----LMQNADTGKHKGFGFVDFELKKSADDAIATMNGFELLGRSIKVGRPTKSSN 850
Query: 519 N 521
N
Sbjct: 851 N 851
>UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya
gossypii Yib1; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|Q8J1F4 Ashbya gossypii Yib1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 345
Score = 37.1 bits (82), Expect = 0.40
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VGN+T AT + + D G + V N+ G KG+ I S S+ +E
Sbjct: 105 IFVGNITTEATAETLEEHFKDCG--EVVRVTILYNKLTGAPKGYAYIEFESSDSIPKALE 162
Query: 453 RLSKKEIHGQ 482
L E+HG+
Sbjct: 163 -LKDSELHGE 171
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L++G L W TD+ + S G ++ ++R +S+GF + S+ M
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFG--SIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAM 60
Query: 450 ERLSKKEIHGQ 482
++ +E G+
Sbjct: 61 NEMNNQEFDGR 71
>UniRef50_A7D716 Cluster: Aminotransferase class-III; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep:
Aminotransferase class-III - Halorubrum lacusprofundi
ATCC 49239
Length = 462
Score = 37.1 bits (82), Expect = 0.40
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 LRKMADGDVDIDLYADDIESDFNRQDEF-AGENVDLYDDVISAPASKPEDGDGPPIIAPN 194
LR++AD + D+ L D+I+ R E+ A E+ D+ DV++ +K G+G P+
Sbjct: 263 LREIADEN-DLPLVFDEIQVGMGRTGEWWASEHYDVTPDVMTT--AKALGGNGQPLSGTM 319
Query: 195 QHPPEETNGNASYHGPVHGH 254
H +T G + G GH
Sbjct: 320 YHEDLDTWGPGDHAGTYRGH 339
>UniRef50_Q9P3U1 Cluster: RNA-binding protein involved in export of
mRNAs; n=1; Schizosaccharomyces pombe|Rep: RNA-binding
protein involved in export of mRNAs -
Schizosaccharomyces pombe (Fission yeast)
Length = 434
Score = 36.7 bits (81), Expect = 0.53
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +3
Query: 231 YHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCV 410
YH HG +YVGNL W +D+++ + +D+G + + G+SKGF V
Sbjct: 270 YHAYPHGPCSDC--IYVGNLPWATSDRNLLDLFTDIGSVIRARIAY---EPTGRSKGFGV 324
Query: 411 ISLGSDQSVRMVMERLS 461
+ ++ +E+L+
Sbjct: 325 VQFENENDAASSIEKLN 341
>UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF- hand; n=1; Medicago
truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic)
Length = 559
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/71 (21%), Positives = 36/71 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++++G L +D D+ +G D ++K ++R G+SKG+ + + + + +
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMG--DIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAI 162
Query: 450 ERLSKKEIHGQ 482
+ + KE G+
Sbjct: 163 DDIHNKEFKGK 173
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L++G L W TD+ + + G ++ ++R G+S+GF + S+
Sbjct: 3 KLFIGGLAWHTTDESLRSGFEKYGA--VEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAA 60
Query: 450 ERLSKKEIHGQ 482
++ +E G+
Sbjct: 61 HEMNNQEFDGR 71
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 36.3 bits (80), Expect = 0.70
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L++GN+++ +D+D+ + D+ + DV+ +R GQ +GF S E
Sbjct: 247 LFIGNMSFEMSDKDLNDLFRDI--RNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKE 304
Query: 453 RLSKKEIHGQ 482
LS K I+G+
Sbjct: 305 ILSAKTIYGR 314
>UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein,
putative; n=2; Aspergillus|Rep: Glycine-rich RNA-binding
protein, putative - Aspergillus clavatus
Length = 133
Score = 36.3 bits (80), Expect = 0.70
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L++G L W TD + G ++ ++R +S+GF + SD M
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFG--QVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAM 60
Query: 450 ERLSKKEIHGQ 482
+ ++ +E G+
Sbjct: 61 DAMNNQEFDGR 71
>UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein
D0; n=123; Deuterostomia|Rep: Heterogeneous nuclear
ribonucleoprotein D0 - Homo sapiens (Human)
Length = 355
Score = 36.3 bits (80), Expect = 0.70
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +3
Query: 162 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 341
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 342 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKK 467
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 35.9 bits (79), Expect = 0.92
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VG L W T + + N S G + D +++ QS+GF + VR V+
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYG--EVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL 58
Query: 450 E 452
E
Sbjct: 59 E 59
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 35.9 bits (79), Expect = 0.92
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL++ T ++ S G D D+ +R GQSKGF I + + +
Sbjct: 5 KIYVGNLSYRMTADELTTVFSQFGQVDKVDI--IIDRDTGQSKGFGFIEMPVNGEAEKAI 62
Query: 450 ERLSKKEIHGQ 482
L EI G+
Sbjct: 63 AGLHGTEIGGR 73
>UniRef50_A7SMA3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 259
Score = 35.9 bits (79), Expect = 0.92
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
++ Y+GNL++ +Q + V D VK +R G+ +GF ++ GS+ +
Sbjct: 112 YKCYIGNLSYSVDEQALEEKFHGYNVVD---VKVITDRETGRPRGFGFVTFGSEDEMDKA 168
Query: 447 MERLSKKEIHGQ 482
+++ +++ G+
Sbjct: 169 IDKFDGEDLDGR 180
>UniRef50_Q6CBR2 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 318
Score = 35.9 bits (79), Expect = 0.92
Identities = 25/97 (25%), Positives = 45/97 (46%)
Frame = +3
Query: 192 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 371
NQ E T+ +AS+H + +Y+G L T+ DIA S G + VK
Sbjct: 10 NQELAEGTSISASWHND----YNDTAYIYIGGLESKLTEMDIATVFSQFG--NPTHVKLS 63
Query: 372 ENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQ 482
++ G+S+GF + +S + ++ + E+ G+
Sbjct: 64 RDQKTGKSRGFAWLKYEDQRSTVLAVDNFNGVELLGR 100
>UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit,
putative; n=2; Filobasidiella neoformans|Rep:
Polyadenylation factor 64 kDa subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 455
Score = 35.9 bits (79), Expect = 0.92
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++V N+ + +++ +AN S+ G ++KF N G+SKG+ + + + +
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDAN--TGRSKGYAFVQFYDEATALSAVR 66
Query: 453 RLSKKEIHGQHPVVTLPTKQ 512
L ++G++ V L T +
Sbjct: 67 NLQDAPVNGRNLRVELSTDE 86
>UniRef50_Q5BD63 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 489
Score = 35.9 bits (79), Expect = 0.92
Identities = 18/70 (25%), Positives = 38/70 (54%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GN+ + TD+D+ + + D + DV+ +R +G +G+ QS + E
Sbjct: 402 LYIGNVPFEMTDRDLNDLVKD--LDGLTDVRVTVDRQSGALRGYIHAEFLDIQSAMVAHE 459
Query: 453 RLSKKEIHGQ 482
+L+++ +G+
Sbjct: 460 KLAQRRPYGR 469
>UniRef50_A6QZK0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 318
Score = 35.9 bits (79), Expect = 0.92
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L++GNL++ TD+++ + D+ D DV+ ++ G+ +GF +S + ME
Sbjct: 203 LFIGNLSFEMTDRELNDLFRDIPNVD--DVRVSVDKRTGRPRGFAHADFLDVESAKAAME 260
Query: 453 RLSKKEIHGQ 482
L +K +G+
Sbjct: 261 ILKEKAPYGR 270
>UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 279
Score = 35.9 bits (79), Expect = 0.92
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LY+GN+ + +TD + N D + +DV+ +R+ G +GF +S +E
Sbjct: 171 LYIGNIPYESTDAALNNLFQD--LEGLKDVRIAVDRSTGWPRGFAHADFKDVESATKAVE 228
Query: 453 RLSKKEIHGQ 482
++ E+ G+
Sbjct: 229 KVKLMELMGR 238
>UniRef50_UPI0000499D3C Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 199
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
R ++YVGNL+ TD+D + V + ++ + ++ +G SKGF ++ +++
Sbjct: 3 RLEVYVGNLSL-NTDKDKLKEVF-ASVGEIKNSRVATHK-DGASKGFGFVTFNDEETAEK 59
Query: 444 VMERLSKKEIHGQHPVVTLPTKQ 512
+ ++ KEI G VV + Q
Sbjct: 60 AVNEMNGKEIDGSIVVVQISRPQ 82
>UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:
At4g13860 - Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL+ TD + A S G + D +R +S+GF ++ S +
Sbjct: 4 RVYVGNLSPTTTDDMLREAFS--GYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 450 ERLSKKEIHGQHPVVTL 500
+ KE++G+ V L
Sbjct: 62 SGMDGKELNGRRVSVKL 78
>UniRef50_Q01CD9 Cluster: CwfJ / zinc finger; n=2; Ostreococcus|Rep:
CwfJ / zinc finger - Ostreococcus tauri
Length = 752
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YV NL+W A I+ + G + DV + +GQS+G+C I+ + + V+ +E
Sbjct: 96 VYVRNLSWKADVGAISEYFGECG--ELVDVHL-ARKPDGQSRGYCFIAFATAEGVQAALE 152
Query: 453 RLSKKEIHGQHPVVTLPT 506
R ++ G+ V + T
Sbjct: 153 R-NEASFFGRDITVEMKT 169
>UniRef50_A2Y1R0 Cluster: Putative uncharacterized protein; n=7;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 104
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/79 (22%), Positives = 44/79 (55%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
G+ ++YVGNL + A ++ + ++ ++ G + +R G+S+GF +S +S
Sbjct: 20 GQESRVYVGNLPYRADERSLKDSFANYGAVSSE---IAVDRETGRSRGFGFVSFQDSKSA 76
Query: 438 RMVMERLSKKEIHGQHPVV 494
++ ++ ++I G++ +V
Sbjct: 77 SDAIKGMNGQDIGGRNVIV 95
>UniRef50_O97318 Cluster: RNA-binding protein, putative; n=2;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 309
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + +Y+GNL T+ DI S G + DV + G+SKG+C +S
Sbjct: 29 HDQYRDSSYIYIGNLDNRLTEGDIVIVFSQYG--EPIDVNLVRDNETGKSKGYCFLSYAD 86
Query: 426 DQSVRMVMERLS 461
+S + ++ +
Sbjct: 87 QRSTILAVDNFN 98
>UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 640
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVG+L + TD+ + G ++ D+ G+SKGFC I + + +
Sbjct: 403 RLYVGSLHFSLTDEAVKTVFEPFGEIEYVDLH--REPETGKSKGFCFIQFKKAEDAKKAL 460
Query: 450 ERLS 461
E+++
Sbjct: 461 EQMN 464
>UniRef50_O04432 Cluster: Glycine-rich protein; n=1; Oryza
sativa|Rep: Glycine-rich protein - Oryza sativa (Rice)
Length = 197
Score = 31.9 bits (69), Expect(2) = 1.6
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = +3
Query: 360 VKFFENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVV 494
V+ +R G+S+GF ++ ++Q++R ++ ++ KE+ G++ V
Sbjct: 73 VQIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITV 117
Score = 22.2 bits (45), Expect(2) = 1.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVG 341
++ +VG L W D+ + A S G
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYG 32
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VG L W T + + N S G + D ++++ QS+GF + VR V+
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYG--EVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVL 81
Query: 450 E 452
+
Sbjct: 82 D 82
>UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm;
n=3; Legionella pneumophila|Rep: RNA binding protein,
cold-inducible rrm - Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 /ATCC 33152 / DSM
7513)
Length = 92
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL + T++ ++ S G +++ ++R GQ KGF I+ + Q +
Sbjct: 6 KIYVGNLPFGTTEEALSIQFSQYG--KIEEMFLIKDRLTGQMKGFGFITFSAQQEAESAL 63
Query: 450 E 452
E
Sbjct: 64 E 64
>UniRef50_Q11AK7 Cluster: ParB-like partition proteins; n=1;
Mesorhizobium sp. BNC1|Rep: ParB-like partition proteins
- Mesorhizobium sp. (strain BNC1)
Length = 336
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 15 QLRK-MADGDVDIDLYADDIESDF--NRQDEFAGENVDLYDDVISAPASKPEDGDGPPII 185
+LRK +A+G +D+ D +ES F +R D++ GE D S AS E+G P++
Sbjct: 55 ELRKALAEGSTIVDIEPDQVESSFVKDRLDDYTGEEFD------SLVASIRENGQAIPVL 108
Query: 186 APNQHPPEE 212
HP E
Sbjct: 109 V-RPHPERE 116
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGF 404
++Y+GNL W T++DI SD ++ V+ +N+ G+ KG+
Sbjct: 263 RVYIGNLAWDTTERDIRKLFSDCVIN---SVRLGKNKETGEFKGY 304
>UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv -
Hordeum vulgare (Barley)
Length = 344
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL + T ++ A S+ G D DV+ ++ +S+GF +++ + + +
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVD--DVQIIYDKITDRSRGFAFVTMATAEEAAKAV 166
Query: 450 ERLSKKEIHGQHPVVTLP 503
+ + + G+ V P
Sbjct: 167 QMFNGALLGGRTVRVNFP 184
>UniRef50_A7AW01 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 279
Score = 35.1 bits (77), Expect = 1.6
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 279 VGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERL 458
VGNL + T+ ++ N + G F ++ ++R +SKG+ + D +RL
Sbjct: 25 VGNLPYEITEIELRNILQGCGNIRFAIIR--KDRQTNKSKGYAHVEYRYDWEAVAAFKRL 82
Query: 459 SKKEIHGQ 482
KEIHG+
Sbjct: 83 LGKEIHGR 90
>UniRef50_A4HV49 Cluster: Putative uncharacterized protein; n=1;
Leishmania infantum|Rep: Putative uncharacterized
protein - Leishmania infantum
Length = 845
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 135 ISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQ- 311
+ + + P G PP+ A P E +GN S H + LY N +DQ
Sbjct: 367 VGSSIASPAPGAAPPVAATTPSPEEHADGNDSAHPAAISCTVEKKTLYGNNEVIHGSDQD 426
Query: 312 DIANAIS 332
DIA A+S
Sbjct: 427 DIATAVS 433
>UniRef50_A6R4B0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 416
Score = 35.1 bits (77), Expect = 1.6
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +3
Query: 204 PEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISD-VGVSDFQDVKFFENR 380
P +GN GRR LYVGN+ + A +D+ ++ V + + V +
Sbjct: 99 PRRDHGNTDSPTTNSFSEGRR--LYVGNMPYMAKKKDVEALFTEGETVYNVERVDISIDP 156
Query: 381 ANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLP 503
G++ +C + L S + M L+ K++ G+ PV P
Sbjct: 157 FTGRNPSYCFVELESKAQADLAMAELNGKDMLGR-PVTIKP 196
>UniRef50_A2QMH2 Cluster: Contig An07c0030, complete genome.
precursor; n=5; Trichocomaceae|Rep: Contig An07c0030,
complete genome. precursor - Aspergillus niger
Length = 441
Score = 35.1 bits (77), Expect = 1.6
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +3
Query: 228 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 407
S H P GRR LYVGN+ + A +D+ A+ D + + + G++ +C
Sbjct: 151 SPHVPQAISEGRR--LYVGNMPYTAKSEDV-QALFDAAEFRIERIDIAIDPFTGRNPSYC 207
Query: 408 VISLGSDQSVRMVMERLSKKEIHGQHPVVTLP----TKQALNQFESQSKTRS 551
+ L + + M L +++ G+ PV P T+ Q + Q + RS
Sbjct: 208 FVDLETKELAERAMTELDGRDMLGR-PVKIKPGVVKTQSERAQQQQQQQQRS 258
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL++ T ++ ++ G + V+ +R GQ +GF + +GS+ +E
Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGT--VKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIE 60
Query: 453 RLSKKEIHGQ 482
L E G+
Sbjct: 61 ALDGAEWMGR 70
>UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein
27C; n=11; Endopterygota|Rep: Heterogeneous nuclear
ribonucleoprotein 27C - Drosophila melanogaster (Fruit
fly)
Length = 421
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 444 VME 452
V++
Sbjct: 64 VLQ 66
>UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10273.1 - Gibberella zeae PH-1
Length = 552
Score = 34.7 bits (76), Expect = 2.1
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 93 DEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRF- 269
DE+ ++ D DD + G G H ++ A +G VH +
Sbjct: 66 DEYMTQDQDDDDDDVDFNLGGGGGGYGSHTGQAGMHDDDQ----APPYGTVHKASAKEDG 121
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++++G L W TDQ + + + G + + + + G+S+GF ++ ++V +VM
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFG--EVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVM 179
>UniRef50_Q83D11 Cluster: RNA-binding protein; n=3; Coxiella
burnetii|Rep: RNA-binding protein - Coxiella burnetii
Length = 129
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
Q+YVGNL + + D+ S G + VK N G+SKG+ ++ + + +
Sbjct: 45 QIYVGNLPYHVVENDLHQYFSRFGA--IESVKIVRNFRTGRSKGYAFVTYVTPKQAVKAL 102
Query: 450 ERLSKKEIHGQHPVVTL 500
+ K++ G+ VV +
Sbjct: 103 D-AHGKDLQGRSLVVRI 118
>UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,
RNA binding protein with 3x RRM domains; n=2;
Cryptosporidium|Rep: Ro ribonucleoprotein-binding
protein 1, RNA binding protein with 3x RRM domains -
Cryptosporidium parvum Iowa II
Length = 693
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVG+L + + D+ G D+ R +SKGFC I S +S M +
Sbjct: 291 RIYVGSLDYSLNEADLKQVFGSFGPIVNIDMP----REGNRSKGFCFIEYTSQESAEMAL 346
Query: 450 ERLSKKEIHGQHPVVTLPTKQA 515
+++ + G+ V PT A
Sbjct: 347 ATMNRFVLKGRPIRVGRPTNAA 368
>UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear
ribonucleoprotein; n=13; Fungi/Metazoa group|Rep:
Related to heterogeneous nuclear ribonucleoprotein -
Neurospora crassa
Length = 503
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+++G L W TDQ + + S G + + + A G+S+GF ++ ++V +VM
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFG--EVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVM 57
>UniRef50_Q7SFZ5 Cluster: Putative uncharacterized protein
NCU03099.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03099.1 - Neurospora crassa
Length = 453
Score = 34.7 bits (76), Expect = 2.1
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VGNL TD+ + A S Q K ++ +SKGF +S +
Sbjct: 297 RLFVGNLAGETTDESLLKAFS--RWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDFFQAA 354
Query: 450 ERLSKKEIHGQHPVVTLPTK 509
+ ++ K I HPVV K
Sbjct: 355 KEMNGKYIQ-SHPVVVHKAK 373
>UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41;
Bacteria|Rep: Putative RNA-binding protein rbpB -
Anabaena sp. (strain PCC 7120)
Length = 103
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL++ T++ + ++ G + V+ +R G+ +GF + +GSD +E
Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYG--SVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60
Query: 453 RLSKKEIHGQ 482
L E G+
Sbjct: 61 ALDGAEWMGR 70
>UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8;
Clupeocephala|Rep: Cold inducible RNA binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L++G L++ T+Q + A S G DV +R +S+GF ++ + + + M
Sbjct: 23 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDV--IRDRETDRSRGFGFVTFENPEDAKDAM 80
Query: 450 ERLSKKEIHGQ 482
++ K++ G+
Sbjct: 81 AAMNGKQVDGR 91
>UniRef50_Q01Q04 Cluster: RNP-1 like RNA-binding protein; n=1;
Solibacter usitatus Ellin6076|Rep: RNP-1 like
RNA-binding protein - Solibacter usitatus (strain
Ellin6076)
Length = 138
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIAN--AISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 440
F +++GNL W T DI A D+ V+D VK N +SKGF + ++ ++
Sbjct: 3 FTVFLGNLPTWVTADDIKQWLAAEDL-VAD--AVKVIRNHETQESKGFAFVEAPTNDEMQ 59
Query: 441 MVMERLSK 464
++ R +
Sbjct: 60 SIIRRFDR 67
>UniRef50_Q1WLW7 Cluster: G strand binding-protein 1/telomere
binding-protein; n=2; Chlamydomonas|Rep: G strand
binding-protein 1/telomere binding-protein -
Chlamydomonas incerta
Length = 225
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +3
Query: 276 YVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMER 455
+VGNL W + QD+ + + G + +V ++ +SKG+ ++ S + ++
Sbjct: 14 FVGNLAWKTSWQDLKDKFRECGNVVYTNVMRDDDGPGSRSKGWGIVEFESPEEALHAIQT 73
Query: 456 LSKKEIHGQHPVV 494
L+ E+ G+ +V
Sbjct: 74 LNGAELGGRRILV 86
>UniRef50_Q8IHX4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1791
Score = 34.3 bits (75), Expect = 2.8
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 192 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 371
N H +GN + HG + H F +Y+ + + D I+N ++ + FQD K
Sbjct: 679 NVHGNNNVHGNNNVHGNNNVHGNNNFDIYIPPAPFDSADNIISNNKKNIKDNSFQDGK-- 736
Query: 372 ENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQH 485
Q K F SLG + + V L+K+ IHG +
Sbjct: 737 ------QKKIF--NSLGENNN--SVFNNLNKEYIHGNN 764
>UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 857
Score = 34.3 bits (75), Expect = 2.8
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Frame = +3
Query: 138 SAPASKPE---DGDGPPIIAP-----NQHPPEETNGNASYHGPVH-GHHGRRFQLYVGNL 290
++PAS+ DGDG +A ++ ++NGN S V G G +L V N+
Sbjct: 720 ASPASRAAGNGDGDGEDGVAKVFNVISRRGAGQSNGNISSDSNVPPGCDG--LKLVVKNV 777
Query: 291 TWWATDQDIANAISDVGVSDFQDVKF------FENRANGQSKGFCVISLGSDQSVRMVME 452
+ AT++DI + + VS+ + V+ F + +GF + +++ R +
Sbjct: 778 PFEATERDIRDLFT--AVSEVRSVRLPRKSHQFSSHRENNHRGFAFVEFLTEEEARRAKQ 835
Query: 453 RLSKKEIHGQHPVV 494
L ++G+H V+
Sbjct: 836 TLGSTHLYGRHLVI 849
>UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear
ribonucleoprotein HRP1; n=3; Neurospora crassa|Rep:
Related to heterogeneous nuclear ribonucleoprotein HRP1
- Neurospora crassa
Length = 344
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L++GN+ + TD ++ N VG+ +DV+ +RA G +GF ++ +E
Sbjct: 180 LFIGNIPYETTDAELNNIF--VGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALE 237
Query: 453 RLSKKEI 473
+L ++
Sbjct: 238 KLQGTQL 244
>UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast
precursor; n=23; Magnoliophyta|Rep: 31 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 315
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
+++YVGN+ W D + S+ G + +R G+S+GF +++ S+ +
Sbjct: 230 YRIYVGNIPWGIDDARLEQLFSEHG--KVVSARVVYDRETGRSRGFGFVTMASEAEMSDA 287
Query: 447 MERLSKKEIHGQ 482
+ L + + G+
Sbjct: 288 IANLDGQSLDGR 299
>UniRef50_A1SF55 Cluster: Phosphate ABC transporter, periplasmic
phosphate-binding protein precursor; n=1; Nocardioides
sp. JS614|Rep: Phosphate ABC transporter, periplasmic
phosphate-binding protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 544
Score = 33.9 bits (74), Expect = 3.7
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +3
Query: 3 AGR*QLRKMADGDVDIDLYADDIESDFNRQDEFAGENV--DLYDDVISAPASKPEDGDGP 176
AG QL K+ D +DL A D+ S N F G+N+ ++ D PA+ + G+GP
Sbjct: 362 AGFQQLAKLKAADSGVDLTARDVTSCNN--PTFDGKNLSHNVLADKAPQPAACDKVGEGP 419
Query: 177 PIIAPNQHPPEETNGNASYHGPVHGHHG 260
A + P G S G G G
Sbjct: 420 CGTATGTNQPSTDGGAGSGDGTATGAGG 447
>UniRef50_Q8RWN5 Cluster: RNA-binding protein-like; n=3; Arabidopsis
thaliana|Rep: RNA-binding protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 310
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+++VG L+ TD+D+ A S G D D + R G+S+GF I+ R M
Sbjct: 8 RIFVGGLSPEVTDRDLERAFSRFG--DILDCQIMLERDTGRSRGFGFITFAD----RRAM 61
Query: 450 ERLSKKEIHGQ 482
+ S +E+HG+
Sbjct: 62 DE-SIREMHGR 71
>UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_9, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 597
Score = 33.9 bits (74), Expect = 3.7
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +3
Query: 240 PVHGHHG-RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 416
P+ H + +++VG L+ T+ +I S G + +V+ ++ NG+SKG+C +
Sbjct: 57 PITSRHAVKGSEVFVGGLSRTITESNIREVFSTCG--EIIEVRMMTDQ-NGKSKGYCFVR 113
Query: 417 LGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSKTRS 551
+ ++ ++ S + G+ V T Q F + K +S
Sbjct: 114 FTTKEAANKAIKEKSGFMVEGKKIGVVPSTDQTTLFFGNLPKGQS 158
>UniRef50_Q86NL1 Cluster: RE27227p; n=5; Endopterygota|Rep: RE27227p
- Drosophila melanogaster (Fruit fly)
Length = 437
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VGN+ + AT++ + S+VG +K +R +G+ KGF ++ M
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVG--PVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 453 RLSKKEIHGQ 482
L+ EI G+
Sbjct: 76 NLNGYEIGGR 85
>UniRef50_A7RK53 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 985
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 TDQD-IANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 461
T++D I A+S + V D++ +++ G S+GFC + L + + ++E ++
Sbjct: 363 TNEDAIQAALSAITVLPIYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIA 416
>UniRef50_A2E957 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 183
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/85 (27%), Positives = 48/85 (56%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 437
G F L NL++ T Q + + +S + + D++ +NR NG+ KG+ + + ++++
Sbjct: 2 GDNFTLCFRNLSYNTTRQTLEDKVSPI--TKVIDIRV-KNR-NGK-KGYAFVEVENEEAG 56
Query: 438 RMVMERLSKKEIHGQHPVVTLPTKQ 512
+ V++ L+ KE+ GQ V + T +
Sbjct: 57 KKVIDELNNKELDGQTISVEVATSK 81
>UniRef50_A6RQM3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 376
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 446
F+L+VGNL TD+ + A S + Q + ++ +SKG+ +S
Sbjct: 243 FRLFVGNLAGEVTDESLHKAFS--RWTSLQKARVIRDKRTTKSKGYGFVSFSDGDDFFQA 300
Query: 447 MERLSKKEIHGQHPVV 494
+ K I G HPV+
Sbjct: 301 ARDMQGKYI-GSHPVL 315
>UniRef50_A5DYN8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 552
Score = 33.9 bits (74), Expect = 3.7
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +3
Query: 207 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 386
+ +G + GP+ G ++FQ+++G+L + T++ I S + VS VK +R N
Sbjct: 94 QSQSGQSGQLGPLGGQQHQQFQMWMGDLDPYWTEESIKTMWSTL-VSAPIFVKIVRDRVN 152
Query: 387 GQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQ-------ALNQFESQSKT 545
F + S + + + ++R + TK A +QF+SQS++
Sbjct: 153 PLKPQFAFVGFDSQELLDLAVKRNGQPVPQSLRRFKLNYTKSGGRGSSYAQSQFQSQSQS 212
Query: 546 RS 551
+S
Sbjct: 213 QS 214
>UniRef50_A3LV28 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 439
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 267 FQLYVGNLTWWATDQDIANAISD-VGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVR 440
++ VGNL W T+ D+ D + D +VK ++R G+ KGF ++ ++
Sbjct: 90 YRARVGNLPWELTEDDVVRHFEDRMQAEDIISEVKLPQDRDTGRLKGFAFVTFNERDALE 149
Query: 441 MVMERLSKKEIHGQHPVVTLPTKQ 512
++ L+ + +G+ V + Q
Sbjct: 150 DALQ-LNLSDFNGRKIFVNVAAPQ 172
>UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2;
n=39; Coelomata|Rep: RNA-binding motif protein, X-linked
2 - Homo sapiens (Human)
Length = 322
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/79 (21%), Positives = 37/79 (46%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 426 DQSVRMVMERLSKKEIHGQ 482
+S + ++ + +I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34;
Euteleostomi|Rep: F-box only protein 42 - Homo sapiens
(Human)
Length = 717
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 111 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 248
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 499 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 542
>UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid
CG16901-PC, isoform C; n=2; Apocrita|Rep: PREDICTED:
similar to squid CG16901-PC, isoform C - Apis mellifera
Length = 320
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+++VG LT TD+DI G F ++ Q KGFC I+ S + V ++
Sbjct: 142 KIFVGGLTPEITDEDIKTYFGQYGTIVELQAPF--DKVKNQRKGFCFITFDSKEVVYKLL 199
Query: 450 ERLSKKEIHGQ 482
+ K+ I+G+
Sbjct: 200 -KTPKQTINGK 209
>UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA binding
motif protein 24; n=3; Endopterygota|Rep: PREDICTED:
similar to RNA binding motif protein 24 - Tribolium
castaneum
Length = 318
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Frame = +3
Query: 147 ASKPEDGDGPPIIAPNQHPPEETNG--------NASYHGPVHGHHGRRFQLYVGNLTWWA 302
AS P + ++ P+ P E +G N + + V +L+VG L +
Sbjct: 41 ASDPSEDQSAKMLMPSGLPANEADGLGLGGLGTNTNTNNGVQHKDTTWTKLFVGGLPYHT 100
Query: 303 TDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQS 434
TDQ + S G + ++ +R G+S+G+ + +G S
Sbjct: 101 TDQSLREHFSVYG--EIEEAVVITDRQTGKSRGYGFVIMGDKSS 142
>UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 80
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
R LY+G L A D + + D G +++ R NG+ +GF ++ SD
Sbjct: 3 RTTLYIGGLQAAADDASVRGLVGDFGA--ISEIRL-ATRDNGECRGFAYVTFESDLDAAK 59
Query: 444 VMERLSKKEIHGQ 482
L + + GQ
Sbjct: 60 ARVALDGRTVSGQ 72
>UniRef50_A0VLS8 Cluster: Putative uncharacterized protein; n=1;
Dinoroseobacter shibae DFL 12|Rep: Putative
uncharacterized protein - Dinoroseobacter shibae DFL 12
Length = 719
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 249 REPGRGMRRCR*FPQVDAGLEQ*WEDRHRPRASKLVLRSR-RHINPHFRQQIHPG 88
RE G+R D L Q DRH PR S+L R R++ P R HPG
Sbjct: 11 REVHHGLRNA----PADRALFQPRSDRHHPRRSRLRRHGRGRYLGPFLRDPAHPG 61
>UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;
core eudicotyledons|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/71 (21%), Positives = 38/71 (53%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L++G L++ T+Q ++ A S G + + +R + +SKGF ++ S + +
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCG--QVVEAQIVMDRVSDRSKGFGFVTFASADEAQKAL 92
Query: 450 ERLSKKEIHGQ 482
+ ++++G+
Sbjct: 93 MEFNGQQLNGR 103
>UniRef50_A3BWU4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 256
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/68 (23%), Positives = 38/68 (55%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+LYVGN+ T+ ++A +D G + +V F ++ G+S+ F +++ + + +
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMF--DKYTGRSRRFGFVTMSTPEEANAAI 128
Query: 450 ERLSKKEI 473
E L++ ++
Sbjct: 129 ESLNETDM 136
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
++++YVGNL T + + N S+ G V A +SKG+ ++ S++ V+
Sbjct: 179 QYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTA--KSKGYGFVTFSSEEEVQA 236
Query: 444 VMERLSKKEIHGQ 482
+ + E+ GQ
Sbjct: 237 AVSTFNNAELEGQ 249
>UniRef50_A2YQN8 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 319
Score = 33.5 bits (73), Expect = 4.9
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 216 NGNASYHGPVHGH-HGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 392
N N ++ PV H ++YVGN+ W Q++ S G + +R G+
Sbjct: 219 NINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGT--VVSTRLLTDRKGGR 276
Query: 393 SKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVV 494
+ + +S S + + + +L HG++ +V
Sbjct: 277 GRVYGFLSFASAEELEAAL-KLDNTHFHGRNILV 309
>UniRef50_Q6BRG5 Cluster: Similar to CA0922|IPF12991 Candida
albicans IPF12991; n=1; Debaryomyces hansenii|Rep:
Similar to CA0922|IPF12991 Candida albicans IPF12991 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 265
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/94 (19%), Positives = 40/94 (42%)
Frame = +3
Query: 192 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 371
N+ +E N S H + +Y+G L + + DI S G+ +
Sbjct: 8 NKINQKELENNVSDSASWHADYKDTSYIYIGFLPFDLNEMDIVKIFSQYGIPTH--INLI 65
Query: 372 ENRANGQSKGFCVISLGSDQSVRMVMERLSKKEI 473
+++ G+S+GFC + +S + ++ + ++
Sbjct: 66 KDKETGKSRGFCYLKYEDYKSCVLAIDNFNGTQL 99
>UniRef50_Q2HG12 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 372
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L+VGNL TD+ + A + Q K ++ +SKGF +S +
Sbjct: 226 RLFVGNLAGETTDESLLKAFA--RWKSVQKAKVVRDKRTTKSKGFGFVSFSDPEDFFQAA 283
Query: 450 ERLSKKEIHGQHPVVTLPTK 509
+ ++ K I HPVV K
Sbjct: 284 KEMNGKYIQ-SHPVVVHKAK 302
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = +3
Query: 207 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 386
E NA P + G+ F +G L W TD + + G + D +
Sbjct: 146 ESNEDNAEETSPFNREDGKMF---IGGLNWETTDDSLRDYFEQFG--EVLDCTVMRDSTT 200
Query: 387 GQSKGFCVISLGSDQSVRMVMER 455
G+S+GF ++ + + V VM +
Sbjct: 201 GRSRGFGFLTFKNPKCVNEVMSK 223
>UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein Cwf29
- Schizosaccharomyces pombe (Fission yeast)
Length = 217
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/76 (21%), Positives = 36/76 (47%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + +Y+GNL + + DI S+ G + D+ ++ G+SKGF +
Sbjct: 24 HQDYSDSAYIYIGNLDFDLNEDDILCVFSEFG--EPVDINLVRDKETGKSKGFAFLKYED 81
Query: 426 DQSVRMVMERLSKKEI 473
+S + ++ ++ ++
Sbjct: 82 QRSTVLAVDNMTNVKL 97
>UniRef50_A6S537 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 381
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
L++GNL + +D D+ + +V + DV+ +R GQ +GF S +E
Sbjct: 256 LFIGNLAFEMSDADLNSLFREV--RNVIDVRVAIDRRTGQPRGFAHADFVDVDSAMKALE 313
Query: 453 RLSKKEI 473
+L KE+
Sbjct: 314 QLQGKEV 320
>UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 163
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 264 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 443
R +YVGN+ + AT ++ + G + + + NR G KGF I +SVR
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPY--NRFTGHPKGFAYIEFSDRESVRT 93
Query: 444 VM 449
M
Sbjct: 94 AM 95
>UniRef50_UPI00006A089A Cluster: CTD-binding SR-like protein rA9; n=3;
Xenopus tropicalis|Rep: CTD-binding SR-like protein rA9 -
Xenopus tropicalis
Length = 1622
Score = 33.1 bits (72), Expect = 6.5
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 12/171 (7%)
Frame = +3
Query: 45 DIDLYADDIESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPIIAP--NQHPPEETN 218
DIDL +D+E D+++ D+ E V +D+ S+ P P +P P
Sbjct: 1228 DIDLSNNDVEDDYDKHDDV--EEVQSLEDIDSSNDLLPNAEVASPQASPLTTDTEPPSPQ 1285
Query: 219 GNASYHGPVHGHHGRRFQLYV----GNLTWWATDQD------IANAISDVGVSDFQDVKF 368
+ Y P G + V +L W + D ++N + VG + DV
Sbjct: 1286 PTSPYSSPFPKKDGLKTPPVVKTEDDDLQWSPSHLDDFLISELSNEVGSVGAASPDDVDL 1345
Query: 369 FENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQALN 521
E++ + +L S + LSK ++ + L +K + N
Sbjct: 1346 EESKTKDELSALGESTLCSPLKTEPDLASLSKAKLPMKRVTWNLQSKNSKN 1396
>UniRef50_Q7XI13 Cluster: Glycine-rich RNA-binding protein-like;
n=9; Magnoliophyta|Rep: Glycine-rich RNA-binding
protein-like - Oryza sativa subsp. japonica (Rice)
Length = 308
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+++VG L+W T++ + A S+ G + + R G+S+GF ++ ++V +
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYG--KVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAI 65
Query: 450 ERLSKKEIHGQ 482
+ E+ G+
Sbjct: 66 RGMHNGELDGR 76
>UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|Rep:
Ribonucleoprotein - Pisum sativum (Garden pea)
Length = 291
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++YVGNL+W D + S+ G + +R G+S+GF +++ ++ + +
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHG--KVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAI 264
Query: 450 ERLSKKEIHGQ 482
L + + G+
Sbjct: 265 AALDGQILEGR 275
>UniRef50_O04319 Cluster: Poly(A)-binding protein isolog (Poly(A)
binding protein-like); n=1; Arabidopsis thaliana|Rep:
Poly(A)-binding protein isolog (Poly(A) binding
protein-like) - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H H R LYVG+L+ T++D+ + S + V V N G+S + I+ S
Sbjct: 14 HQHSSRFGSLYVGDLSPDVTEKDLIDKFS-LNV-PVVSVHLCRNSVTGKSMCYAYINFDS 71
Query: 426 DQSVRMVMERLSKKEIHGQ 482
S M RL+ ++ G+
Sbjct: 72 PFSASNAMTRLNHSDLKGK 90
>UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium
discoideum|Rep: RNA-binding protein - Dictyostelium
discoideum (Slime mold)
Length = 551
Score = 33.1 bits (72), Expect = 6.5
Identities = 12/71 (16%), Positives = 37/71 (52%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+++ G + ++++ ++ ++ +++ +++ G+SKGF + R V+
Sbjct: 93 EIFFGGVNKTVNEEELLEIFNENSDNNVLEIRLMKDKLTGESKGFGFVLFNDRSMCRNVI 152
Query: 450 ERLSKKEIHGQ 482
++L+ K I G+
Sbjct: 153 DKLNGKSIKGK 163
>UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n=3;
Cryptosporidium|Rep: 5x RRM. Mrd1p like, splicing
related - Cryptosporidium parvum Iowa II
Length = 806
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
+L + NL + AT DI + + VG ++ +++G +KG+C I +
Sbjct: 716 KLLIKNLPFQATKSDIMSLFNSVGT--VTSIRI-PKKSDGTNKGYCFIEFLGKLEAISAL 772
Query: 450 ERLSKKEIHGQHPVV 494
E+ ++G+H ++
Sbjct: 773 EQFQHTHLYGRHLII 787
>UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid)
protein protein 1, isoform b; n=3; Caenorhabditis|Rep:
Homologous to drosophila sqd (Squid) protein protein 1,
isoform b - Caenorhabditis elegans
Length = 308
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 216 NGNASYHGPVHGHHGRRFQ---LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 386
NGNAS +GH + + ++VG ++ ++D+++ + G VK+ +R N
Sbjct: 9 NGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY--DRTN 66
Query: 387 GQSKGFCVISLGSDQSVRMVM 449
G+S+GF + + + ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLAL 87
>UniRef50_A2GKC7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 288
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VGNL++ +T+ + S G + + +A+GQSKG + + + + +
Sbjct: 25 VFVGNLSYKSTEGSLIAVFSSYG--QLRGARVVR-QADGQSKGVAFVEFETKEDAKKAVA 81
Query: 453 RLSKKEIHGQHPVVTL 500
L++K++ G+ + L
Sbjct: 82 ELNRKQVDGREVFLKL 97
>UniRef50_A2DHF2 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 202
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VGNL++ T++ + S+ G + + +G+SKGF I + + +
Sbjct: 47 VHVGNLSFETTEESLKIKFSEFG--NVISSRIPVRAQSGKSKGFGFIEYATQEEADKAIA 104
Query: 453 RLSKKEIHGQHPVVTL 500
++KKE G+ VV +
Sbjct: 105 EMNKKEFEGRTIVVDI 120
>UniRef50_Q6C5Y5 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 406
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/97 (22%), Positives = 41/97 (42%)
Frame = +3
Query: 192 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 371
N+ PP +G V + ++YVGNL + + + + G F DV
Sbjct: 53 NRSPPRRNSGPPQMLQQVKDSSQQDRRVYVGNLAYEVKWHHLKDFMRQAGNVLFADVLLM 112
Query: 372 ENRANGQSKGFCVISLGSDQSVRMVMERLSKKEIHGQ 482
N G+SKG ++ + + + L+ +E+ G+
Sbjct: 113 PN---GRSKGCGIVEYSTREEAENAVNTLTNQELMGR 146
>UniRef50_A4QRR2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 295
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 258 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISL-GSDQS 434
GRR +Y+GNL + D+ + G +++ VK + + +++G+C + +D++
Sbjct: 16 GRR--IYIGNLNYELQSSDVEGMLQQSGFPNYEAVKIPVDPGSQRNRGYCFVDFTTADEA 73
Query: 435 VRMVME 452
R + E
Sbjct: 74 QRSLSE 79
>UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding protein
4; n=7; Saccharomycetales|Rep: Nuclear polyadenylated
RNA-binding protein 4 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 534
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++++G L W T+ ++ G D+K ++ A G+S+GF +S SV V+
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGT--VTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 450 E 452
+
Sbjct: 218 K 218
>UniRef50_UPI000051A0F5 Cluster: PREDICTED: similar to Cleavage
stimulation factor 64 kilodalton subunit CG7697-PA; n=2;
Apocrita|Rep: PREDICTED: similar to Cleavage stimulation
factor 64 kilodalton subunit CG7697-PA - Apis mellifera
Length = 441
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
++VGN+ + AT++++ + S+VG K +R G+ KG+ ++ M
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVG--PVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 453 RLSKKEIHGQ 482
L+ EI G+
Sbjct: 77 NLNGYEIGGR 86
>UniRef50_Q4QRG7 Cluster: Zgc:113884; n=5; Danio rerio|Rep:
Zgc:113884 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 434
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+++G + T+ DI S G + ++ ++ G+SKGFC + +S + ++
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYG--EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 95
Query: 453 RLSKKEIHGQ 482
+ +I G+
Sbjct: 96 NFNGIKIKGR 105
>UniRef50_O25501 Cluster: Ss-DNA binding protein 12RNP2; n=4;
Helicobacter|Rep: Ss-DNA binding protein 12RNP2 -
Helicobacter pylori (Campylobacter pylori)
Length = 82
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL + AT + + S G +VK +R + KGF + + ++SV +
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFG--KVFNVKLIYDRETKKPKGFGFVEM-QEESVSEAIA 60
Query: 453 RLSKKEIHGQHPVVT 497
+L + G+ VT
Sbjct: 61 KLDNTDFMGRTIRVT 75
>UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: RNA-binding protein -
Alteromonas macleodii 'Deep ecotype'
Length = 154
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 246 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 425
H + G LYVGNL + A + + S + Q V+ ++R G+ KG+ I + +
Sbjct: 65 HSNEGSIETLYVGNLPYRANENAVKEYFS--SFIEVQSVRLMKDRKTGKRKGYGFIEVVT 122
Query: 426 D 428
D
Sbjct: 123 D 123
>UniRef50_A0TAE1 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia ambifaria MC40-6|Rep:
Putative uncharacterized protein precursor -
Burkholderia ambifaria MC40-6
Length = 423
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = -3
Query: 348 RRHRHPRSRSQYLGPLPTMLGCRRKVENGGHDVREPGR 235
RR RH LGP P RR VE+G HD RE GR
Sbjct: 112 RRGRHDARHRPRLGPRPA----RRVVESGRHDGREHGR 145
>UniRef50_A0HBM8 Cluster: RNA-binding region RNP-1; n=1; Comamonas
testosteroni KF-1|Rep: RNA-binding region RNP-1 -
Comamonas testosteroni KF-1
Length = 83
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
LYV NL + + + + S G D + +R GQS+GF + +G+ + ++
Sbjct: 5 LYVSNLGYGVDRETLKSHFSSCG--DVLSSEVITDRNTGQSRGFGFVEMGTAAQAKTAID 62
Query: 453 RLSKKEIHGQHPVVTL 500
L+ + + G+ V+L
Sbjct: 63 SLNDQSLGGRVISVSL 78
>UniRef50_A4S2D6 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 194
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 273 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 452
+YVGNL W Q++ + VG DV +G+S+G+ V++ Q ++ +E
Sbjct: 116 VYVGNLPWSTRWQELKDIFRKVGNVAHADVTM---GFDGRSRGWGVVTFMDPQCAQVAIE 172
Query: 453 RLS 461
RL+
Sbjct: 173 RLN 175
>UniRef50_Q8SRD9 Cluster: POLYADENYLATE BINDING PROTEIN 2; n=1;
Encephalitozoon cuniculi|Rep: POLYADENYLATE BINDING
PROTEIN 2 - Encephalitozoon cuniculi
Length = 432
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 186 APNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVK 365
AP PE T S P +L + N+ + A+ ++I V D +
Sbjct: 328 APICSVPESTGEEPSKRPPEEASGQLMNKLLIRNVPFQASKEEIRKIFGSFHVVDVR--- 384
Query: 366 FFENRANGQSKGFCVISLGSDQSVRMVMERL-SKKEIHGQHPVV 494
+ G S+GFC ++L S V +E S ++G+ V+
Sbjct: 385 -IPVKREGSSRGFCFVTLNSPDDVTAAIEHFGSSTHLYGRRLVL 427
>UniRef50_Q4WNU1 Cluster: Integral ER membrane protein Scs2,
putative; n=5; Trichocomaceae|Rep: Integral ER membrane
protein Scs2, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 328
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 DLYADDIESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPP-IIAPNQHPPEETNGNA 227
D+ ++ S F + + + + + + + A +SK E G P I AP + PP T+ A
Sbjct: 138 DMEFSNVSSIFEKASKSSIQERKIRVNWLPAESSKGEQGKDPNGISAPEEEPPSYTSPGA 197
Query: 228 SYHGPVHG 251
+Y P G
Sbjct: 198 NYQTPAVG 205
>UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 518
Score = 32.7 bits (71), Expect = 8.6
Identities = 22/114 (19%), Positives = 45/114 (39%)
Frame = +3
Query: 63 DDIESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGP 242
D SD + ++E D + ++ + + P + PE + +
Sbjct: 200 DSDSSDSSEEEEKKASGSDSDSSDSDSESASEAEAEAPSKKRKAEDEPEASTKKSKTEET 259
Query: 243 VHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGF 404
+ + L+VGNL+W D+ + + G + + ++A G+SKGF
Sbjct: 260 AEDNGSKN--LFVGNLSWNIDDEWLYREFEEFG--EISGARVISDKATGRSKGF 309
>UniRef50_A1CFG8 Cluster: Pre-mRNA splicing factor (Prp24), putative;
n=11; Eurotiomycetidae|Rep: Pre-mRNA splicing factor
(Prp24), putative - Aspergillus clavatus
Length = 1310
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/93 (25%), Positives = 45/93 (48%)
Frame = +3
Query: 234 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 413
HGP++ GR +++V N+ W A++ D+ + S G + V+ + +G SKGF I
Sbjct: 999 HGPIY--EGR--EIHVSNIDWKASEDDLKDLFSKYG--RVETVR-IPRKVDGGSKGFGYI 1051
Query: 414 SLGSDQSVRMVMERLSKKEIHGQHPVVTLPTKQ 512
+ + + + ++E + V L T Q
Sbjct: 1052 VFSTKEEANAAL-AMHEQEFRSRPLQVRLSTPQ 1083
>UniRef50_A1CDR4 Cluster: Ribonucleoprotein, putative; n=1;
Aspergillus clavatus|Rep: Ribonucleoprotein, putative -
Aspergillus clavatus
Length = 329
Score = 32.7 bits (71), Expect = 8.6
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +3
Query: 213 TNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 392
T G + P GRR LYVGN+ + A +D+ A+ + + + G+
Sbjct: 62 TFGKLNSQVPPAISEGRR--LYVGNMPYTAKSEDV-EALFTATKFPIERIDIAIDPFTGR 118
Query: 393 SKGFCVISLGSDQSVRMVMERLSKKEIHGQHPVVTLP 503
+ +C + L + +S M L ++ G+ PV P
Sbjct: 119 NPSYCFVDLDTKESAERAMNELDGSDLLGR-PVKIKP 154
>UniRef50_Q969S3 Cluster: Zinc finger protein 622; n=24;
Euteleostomi|Rep: Zinc finger protein 622 - Homo sapiens
(Human)
Length = 477
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 51 DLYADDIESDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPI 182
DL DD E D + +E E+ + DDV+ A + E +GPP+
Sbjct: 204 DLDGDDWE-DIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPL 246
>UniRef50_Q5UQ46 Cluster: Putative ATP-dependent RNA helicase L396;
n=1; Acanthamoeba polyphaga mimivirus|Rep: Putative
ATP-dependent RNA helicase L396 - Mimivirus
Length = 519
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 396 KGFCVISLGSDQ-SVRMVMERLSKKEIHGQHPVVTLPTKQALNQFESQSKTRS 551
+G V+ LG+ + S++ + R+ +KE++ +HP+V + F+ QSK+R+
Sbjct: 391 EGLNVVILGTPKTSIKQSVGRILRKEVYEEHPIVIDIVDVDNDTFKKQSKSRN 443
>UniRef50_P36629 Cluster: Splicing factor U2AF 59 kDa subunit; n=1;
Schizosaccharomyces pombe|Rep: Splicing factor U2AF 59
kDa subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 517
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/70 (22%), Positives = 30/70 (42%)
Frame = +3
Query: 270 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 449
++Y+ NL + + + G D + +N A+G SKGFC + + +
Sbjct: 311 KIYISNLPLNLGEDQVVELLKPFG--DLLSFQLIKNIADGSSKGFCFCEFKNPSDAEVAI 368
Query: 450 ERLSKKEIHG 479
L K+ +G
Sbjct: 369 SGLDGKDTYG 378
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,529,696
Number of Sequences: 1657284
Number of extensions: 15256176
Number of successful extensions: 49004
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 46039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48879
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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