Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D24
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 87 1e-16
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 71 1e-11
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 67 2e-10
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 66 4e-10
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 60 3e-08
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 58 1e-07
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 54 2e-06
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 44 0.002
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 44 0.002
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 44 0.002
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 42 0.007
UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 40 0.030
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 39 0.069
UniRef50_Q4T6N5 Cluster: Chromosome 9 SCAF8684, whole genome sho... 32 7.9
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 87.4 bits (207), Expect = 1e-16
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+ +GVV D+ GFT V K K ++PAKN +R FKAG RRSL K+K LL + YR DL
Sbjct: 51 KTLGVVPAADKKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDL 110
Query: 296 CKATLRRASAILRSQRP 346
+A LRRASA+LRSQ+P
Sbjct: 111 TQAALRRASAVLRSQKP 127
Score = 38.3 bits (85), Expect = 0.091
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 19 LXHQRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
L +R++KKPFS PNN+ + S+R +G+ HK +
Sbjct: 19 LLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKT 52
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +2
Query: 143 DRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRAS 322
++ G VY K KPAK ++ K G RR+L K+ ++KAN YR DL A LRRAS
Sbjct: 59 EKKGVNFVYNRKKVLNKPAKAPVKVTLKEGPRRTLKKIANMMKANRYRADLRGAALRRAS 118
Query: 323 AILRSQRP 346
AILRSQRP
Sbjct: 119 AILRSQRP 126
Score = 36.7 bits (81), Expect = 0.28
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 19 LXHQRNLKKPFSKXPNNVPHLHSFRSNGLXH 111
L +R+++KPFS P N+ +L SFR +GL H
Sbjct: 19 LLKRRDIRKPFSTEPGNLTNLSSFRYSGLVH 49
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+ VGV D G VV K RKPA + +R AR +L ++ +++ N YR DL
Sbjct: 47 KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106
Query: 296 CKATLRRASAILRSQRPI 349
A +RRASAILRSQ+P+
Sbjct: 107 RMAAIRRASAILRSQKPV 124
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 66.1 bits (154), Expect = 4e-10
Identities = 36/76 (47%), Positives = 43/76 (56%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+ V V D GF V K AK KP K+ I AG RRSLYK++R L YR DL
Sbjct: 49 KTVDVRAAKDGKGFVVTTKRAKQQNKPGKSNISVTMSAGPRRSLYKLRRYLDGGKYRKDL 108
Query: 296 CKATLRRASAILRSQR 343
+ LR+ASAIL SQ+
Sbjct: 109 TQVALRKASAILESQK 124
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 19 LXHQRNLKKPFSKXPNNVPHLHSFRSNGLXHKSSRWCRGAP*QXGXHSSVQXSKGYQK 192
L +R++KKPFS P N+ ++ SFR NGL + R A G + + +K K
Sbjct: 17 LLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGKGFVVTTKRAKQQNK 74
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+ VGV D G K +K KPAK +R RR+ +K+ L+ YR DL
Sbjct: 52 KVVGVSSAADNKGVLFKTKRSKVVSKPAKMFVRATLSKDRRRAFKSIKKNLECTEYRPDL 111
Query: 296 CKATLRRASAILRSQRP 346
+ +RRASAIL SQRP
Sbjct: 112 AELAVRRASAILSSQRP 128
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 57.6 bits (133), Expect = 1e-07
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKA-NHYRTD 292
+A+ V H G T VY K KPAK L R G RR++ ++ +K +YR D
Sbjct: 50 RALTVEPHSSGKGVTFVYLAHKGATKPAKRLKRVQLVKGPRRTMVSIRNWIKGMGYYRRD 109
Query: 293 LCKATLRRASAILRSQRPI 349
L + RRASAIL+SQR I
Sbjct: 110 LRRVCQRRASAILKSQRAI 128
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+ VGV P G + + KA KP K + + +RR+L ++ + N+YR DL
Sbjct: 47 KVVGVDAAPSGKGVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDL 106
Query: 296 CKATLRRASAILRSQRP 346
+RRA AILRSQ+P
Sbjct: 107 KDPAMRRACAILRSQKP 123
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 44.0 bits (99), Expect = 0.002
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGAR-RSLYK-VKRLLKANHYRT 289
+AVGV + R + K +KPAK L R+ A A R YK + + YR
Sbjct: 52 KAVGVQANSPRGVVLITKTNPKNAQKPAK-LFRKDVIANASSRKTYKSIAGRIGRTGYRD 110
Query: 290 DLCKATLRRASAILRSQRP 346
DL K ++ RASAIL SQRP
Sbjct: 111 DLVKVSVARASAILSSQRP 129
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 43.6 bits (98), Expect = 0.002
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 113 SQAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGAR-RSLYK-VKRLLKANHYR 286
++AVGV + + G V+ K ++PAKNL+ + A R +YK V N YR
Sbjct: 56 TKAVGV-QATENGGVVVITKKPGNPQQPAKNLVSVSWGPNAATRKIYKAVASKTAKNGYR 114
Query: 287 TDLCKATLRRASAILRSQRP 346
DL + + R SAI RSQ+P
Sbjct: 115 ADLREDAVARVSAIRRSQKP 134
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 43.6 bits (98), Expect = 0.002
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 113 SQAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPF--KAGARRSLYKVKRLLKANHYR 286
++A+GV + + G V+ K + ++P KN +R F KA R+ V N YR
Sbjct: 56 TKAIGV-QPTENGGVVVLTKKSGNAQQPGKNAVRVTFGPKASTRKIYKGVADKTAKNGYR 114
Query: 287 TDLCKATLRRASAILRSQRP 346
DL + + R SAI RSQ+P
Sbjct: 115 ADLREDAVARVSAIRRSQKP 134
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 41.9 bits (94), Expect = 0.007
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 158 TVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 328
T+ K KAT+KPAK P + GAR ++ + N+YR DL KA L + S +
Sbjct: 60 TLTTKIEKATKKPAKAQNAVPLRKGARGGANTIRANISRNYYRRDLKKAALAKWSRL 116
>UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 41.5 bits (93), Expect = 0.010
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 110 TSQAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGA-RRSLYK-VKRLLKANHY 283
++QA+GV + + G + K +++PAK+L + GA R +YK V N Y
Sbjct: 90 SNQAIGV-QATENGGVVTITKKPGTSQQPAKSLAVVTYGPGASNRKIYKGVADRTAKNGY 148
Query: 284 RTDLCKATLRRASAILRSQR 343
R DL + + R SAI RSQ+
Sbjct: 149 RADLRQEAVSRVSAIRRSQK 168
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 39.9 bits (89), Expect = 0.030
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
+A+G+ E G V K KPAK + R F G RR+L K++ L YR +L
Sbjct: 47 KAIGIKEERYGKGVVVTTKNVAKDHKPAKAVTRTKFVRGRRRTLQKIRNLTCKQKYRREL 106
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 38.7 bits (86), Expect = 0.069
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 113 SQAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYK-VKRLLKANHYRT 289
++AVGV D V K PA+++I+ K G R + K V+ L+K + R
Sbjct: 41 NKAVGVTLAEDNKSVVVSVKKTGKKNLPAQSVIKTTIKRGGARGIVKSVQGLVKGRNAR- 99
Query: 290 DLCKATLRRASAILRSQR 343
K RRAS +LRS R
Sbjct: 100 -FAKLAARRASQLLRSVR 116
>UniRef50_Q4T6N5 Cluster: Chromosome 9 SCAF8684, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF8684, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 966
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
L AY + R+GC C+ L C+DGP G
Sbjct: 360 LEAYARCLRMGCRCIELDCWDGPEG 384
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,786,116
Number of Sequences: 1657284
Number of extensions: 6926487
Number of successful extensions: 16260
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16250
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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