Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D24
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457024-1|CAG33305.1|  137|Homo sapiens RPL28 protein.                67   4e-11
BC011582-1|AAH11582.1|  137|Homo sapiens ribosomal protein L28 p...    67   4e-11
BC010182-1|AAH10182.1|  137|Homo sapiens ribosomal protein L28 p...    67   4e-11
BC010173-1|AAH10173.1|  137|Homo sapiens ribosomal protein L28 p...    67   4e-11
U14969-1|AAA85657.1|  137|Homo sapiens ribosomal protein L28 pro...    66   8e-11
AB007179-1|BAA25838.1|   53|Homo sapiens ribosomal protein L28 p...    48   1e-05
M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human phospholi...    31   1.6  
DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma ...    31   1.6  
AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma ...    31   1.6  
AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma ...    31   1.6  
AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein p...    31   1.6  
AB209627-1|BAD92864.1|   95|Homo sapiens ribosomal protein L28 v...    31   2.8  
X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for ...    30   4.9  
M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein.                   30   4.9  
BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein.        30   4.9  
BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein.        30   4.9  
BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein.        30   4.9  
BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein.        30   4.9  
AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2...    30   4.9  
AB208914-1|BAD92151.1| 1278|Homo sapiens 1-phosphatidylinositol-...    30   4.9  

>CR457024-1|CAG33305.1|  137|Homo sapiens RPL28 protein.
          Length = 137

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +2

Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
           + VGV    D  G  VV K     RKPA + +R      AR +L  ++ +++ N YR DL
Sbjct: 47  KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106

Query: 296 CKATLRRASAILRSQRPI 349
             A +RRASAILRSQ+P+
Sbjct: 107 RMAAIRRASAILRSQKPV 124



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 19  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 48


>BC011582-1|AAH11582.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +2

Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
           + VGV    D  G  VV K     RKPA + +R      AR +L  ++ +++ N YR DL
Sbjct: 47  KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106

Query: 296 CKATLRRASAILRSQRPI 349
             A +RRASAILRSQ+P+
Sbjct: 107 RMAAIRRASAILRSQKPV 124



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 19  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 48


>BC010182-1|AAH10182.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +2

Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
           + VGV    D  G  VV K     RKPA + +R      AR +L  ++ +++ N YR DL
Sbjct: 47  KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDL 106

Query: 296 CKATLRRASAILRSQRPI 349
             A +RRASAILRSQ+P+
Sbjct: 107 RMAAIRRASAILRSQKPV 124



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 19  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 48


>BC010173-1|AAH10173.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 33/78 (42%), Positives = 45/78 (57%)
 Frame = +2

Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
           + VGV    D  G  VV K     RKPA + +R      AR +L  ++ +++ N YR DL
Sbjct: 47  KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106

Query: 296 CKATLRRASAILRSQRPI 349
             A +RRASAILRSQ+P+
Sbjct: 107 RMAAIRRASAILRSQKPV 124



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 19  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 48


>U14969-1|AAA85657.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 32/78 (41%), Positives = 45/78 (57%)
 Frame = +2

Query: 116 QAVGVVEHPDRXGFTVVYKXAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDL 295
           + VGV    D  G  VV K     RKPA + +R      AR +L  ++ +++ N YR DL
Sbjct: 47  KTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDL 106

Query: 296 CKATLRRASAILRSQRPI 349
             A +RRASAILR+Q+P+
Sbjct: 107 RMAAIRRASAILRTQKPV 124



 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 19  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 48


>AB007179-1|BAA25838.1|   53|Homo sapiens ribosomal protein L28
           protein.
          Length = 53

 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +2

Query: 209 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 349
           +R      AR +L  ++ +++ N YR DL  A +RRASAILRSQ+P+
Sbjct: 4   VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50


>M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human
           phospholipase C-gamma mRNA, complete cds. ).
          Length = 1290

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
           L AY +  R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374


>DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1291

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
           L AY +  R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374


>AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1290

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
           L AY +  R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374


>AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1291

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
           L AY +  R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374


>AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein
           protein.
          Length = 1412

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -3

Query: 406 LSAY-KLFRLGCGCLSLFCFDGPLG 335
           L AY +  R+GC C+ L C+DGP G
Sbjct: 472 LEAYARCLRMGCRCIELDCWDGPDG 496


>AB209627-1|BAD92864.1|   95|Homo sapiens ribosomal protein L28
           variant protein.
          Length = 95

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 28  QRNLKKPFSKXPNNVPHLHSFRSNGLXHKSS 120
           +RN K+ +S  PNN+   +SFR NGL H+ +
Sbjct: 27  KRN-KQTYSTEPNNLKARNSFRYNGLIHRKT 56


>X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for
           phospholipase C. ).
          Length = 1252

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein.
          Length = 1252

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein.
          Length = 1265

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein.
          Length = 1265

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein.
          Length = 1265

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein.
          Length = 1265

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2
           protein.
          Length = 1252

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 347 RCLRMGCRCIELDCWDGPDG 366


>AB208914-1|BAD92151.1| 1278|Homo sapiens
           1-phosphatidylinositol-4,5-bisphosphate
           phosphodiesterase gamma 2 variant protein.
          Length = 1278

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 394 KLFRLGCGCLSLFCFDGPLG 335
           +  R+GC C+ L C+DGP G
Sbjct: 360 RCLRMGCRCIELDCWDGPDG 379


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,439,555
Number of Sequences: 237096
Number of extensions: 1157074
Number of successful extensions: 9420
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9420
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)