Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D23
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella ve...    33   1.9  
UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules an...    31   7.5  
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr...    31   7.5  
UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2; ...    31   9.9  

>UniRef50_A7T0I5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 242

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +2

Query: 158 CVYFTCCVLCIFRLLTSWLFCLHL-----LGPIHLLRSLIDNQKAILNA 289
           CVY  C   C+F     WL C+ L      G + L+ S+ + Q+  LNA
Sbjct: 147 CVYLPCIAFCLFLFRKIWLLCISLGLNGVGGSLILIPSVPEMQRCCLNA 195


>UniRef50_Q01F11 Cluster: COG3321: Polyketide synthase modules and
            related proteins; n=3; cellular organisms|Rep: COG3321:
            Polyketide synthase modules and related proteins -
            Ostreococcus tauri
          Length = 11541

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +2

Query: 119  VXVPSCLHRPSCRCVYFTCCVLCIFRLLTSWLFCLHLLGPIHLLRSLIDNQKAIL--NAI 292
            V  P+C  R  C  +++     C   +LT+++     +  IH+LR L DNQ   +  NA 
Sbjct: 1797 VASPACPPRKVCFSIFYVKYSECTAGILTNFVRKPTSISRIHILRRLRDNQNKQIHPNAF 1856

Query: 293  EFRLC 307
            +  +C
Sbjct: 1857 KSPIC 1861


>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
           alga; n=1; Ostreococcus tauri|Rep: T08009 probable
           ribosomal protein L5-green alga - Ostreococcus tauri
          Length = 331

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 240 MGPSRCRQNSQEVSRRNM-QSTQQVKYTQRQLGRCR 136
           MG  R ++ SQ V++    QS  QVK+ +R+LG C+
Sbjct: 1   MGKRRQKRKSQSVAKTTAYQSRYQVKFARRRLGACK 36


>UniRef50_Q54D83 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Dictyostelium discoideum AX4
          Length = 988

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -1

Query: 219 QNSQEVSRRNMQSTQQVKYTQRQLGRCRQL 130
           Q +Q++ ++ MQ  QQ++Y Q+QL + +Q+
Sbjct: 36  QQAQQLQQQQMQHQQQIQYAQQQLQQAQQI 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,478,551
Number of Sequences: 1657284
Number of extensions: 2377490
Number of successful extensions: 7028
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7022
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)