Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D23
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   0.93 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.93 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   8.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 164 YFTCCVLCIFR 196
           YF C ++CIFR
Sbjct: 160 YFLCVIVCIFR 170


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 158 CVYFTCCVLCIFRLLTSWLFCLH 226
           C+Y+  C   IF +   +L C++
Sbjct: 145 CIYYFYCAFIIFTVHLLFLLCIY 167



 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 134 CLHRPSCRCVYFTCCVLCIFRLLTSWLFCLHLLGPIHLL 250
           C++   C  + FT  V  +F L     FC  ++  +HLL
Sbjct: 145 CIYYFYCAFIIFT--VHLLFLLCIYHFFCAFIIFTMHLL 181



 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 158 CVYFTCCVLCIFRLLTSWLFCLHLLGPIHLL 250
           C+Y+      +F +    L C++    +HLL
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFYYMHLL 267



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +2

Query: 173 CCVLCIFRLLTSWLFCLH 226
           CC   IF +   +L C++
Sbjct: 269 CCAFIIFTMHLLFLLCIY 286


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 203 TSWLFCLHLLG 235
           T WL CL LLG
Sbjct: 5   TYWLCCLLLLG 15


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 203 TSWLFCLHLLG 235
           T WL CL LLG
Sbjct: 5   TYWLCCLLLLG 15


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,803
Number of Sequences: 336
Number of extensions: 786
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)