Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D22
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    28   0.092
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   2.0  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   2.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.0  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 209 VKLESVVTGFGSFSILIGCTSEFTVFTTSDFKESLSIVVLLQYIQHNTITI 57
           VK+   + G  +F +L+ CTS   V    D   S+ I+    + QH+ I +
Sbjct: 144 VKVVREINGIFAFQVLM-CTSMNFVLLIGDLHTSIYIIFFDMFYQHHKIVL 193


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = -1

Query: 291 NFF*STRRVNRNGRFSKHMN-IRYYRH----LSQA*VSGHRFRVFFNINRL 154
           NF   T  +   G ++K  N IR + H    + +  V  HRFR+ FNI+ +
Sbjct: 64  NFEYDTASLPLPGLYTKSANTIRSFTHVESPIDEKFVHPHRFRLKFNISSI 114



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -2

Query: 470 HSLANCLVNSAKPK---SGCC 417
           H++   LVNS KPK     CC
Sbjct: 317 HAIVQSLVNSMKPKEVPGPCC 337


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
 Frame = -1

Query: 612 ILQIRLLF-CELFISICSFVFR---TFFNISFFILIC 514
           I  I LLF C L I +C + F      F +   +L+C
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVC 257


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 163 NIEKDPKPVTTDSSLTQVPIVSNVHVLAETP 255
           N+ KDP+  T +     + +V+  H L E P
Sbjct: 31  NLPKDPRQWTREHVAQWINLVTQQHGLPEVP 61


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 163 NIEKDPKPVTTDSSLTQVPIVSNVHVLAETP 255
           N+ KDP+  T +     + +V+  H L E P
Sbjct: 31  NLPKDPRQWTREHVAQWINLVTQQHGLPEVP 61


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 547 CAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQ 648
           C EY+  + YKE   Q        +   L  VPQ
Sbjct: 156 CMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 547 CAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQ 648
           C EY+  + YKE   Q        +   L  VPQ
Sbjct: 156 CMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 547 CAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQ 648
           C EY+  + YKE   Q        +   L  VPQ
Sbjct: 156 CMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 293 QKHHLKSPKKENPKQLAIQLHPVNLS 370
           Q+HH ++   E    +  + HP++LS
Sbjct: 315 QQHHQQNMSHEELSAMVNRCHPLSLS 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,867
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)