Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D22
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0562 + 4907937-4907990,4908890-4909075,4909180-4909285,490... 62 6e-10
01_01_0605 + 4497308-4497472,4497719-4497904,4498898-4499003,449... 61 1e-09
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 53 2e-07
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 52 5e-07
02_05_0261 + 27243898-27243938,27244068-27244157,27244293-272443... 46 4e-05
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 43 3e-04
02_03_0176 + 16010806-16011095,16011983-16012061,16012389-160124... 40 0.003
08_01_0008 - 65366-65497,65588-65759,65846-65972,66058-66140,662... 37 0.020
04_04_0814 + 28266590-28266615,28266780-28266860,28266986-282670... 37 0.020
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 33 0.18
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 31 0.98
04_04_0633 - 26771487-26771591,26771708-26771782,26771906-267719... 30 2.3
06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 29 3.0
03_05_0506 + 25010059-25010089,25010606-25010654,25010812-250108... 29 4.0
12_02_1152 + 26515422-26515460,26516317-26516454,26518647-265188... 29 5.2
04_04_1668 + 35217254-35218531 29 5.2
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 28 9.2
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042 28 9.2
04_04_1651 - 35057525-35057680,35058302-35058311,35058429-350585... 28 9.2
02_05_0104 - 25858414-25858509,25858711-25858782,25859081-258591... 28 9.2
>05_01_0562 +
4907937-4907990,4908890-4909075,4909180-4909285,
4909377-4909513,4909989-4910072,4910157-4910248,
4910358-4910466,4910554-4910640,4910737-4910829,
4911384-4911581,4911659-4911810,4911910-4912060,
4912174-4912272,4912362-4912535,4912680-4912758,
4912858-4912979
Length = 640
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
+D AP++ + ++ F R L+ P+L E+ ++L W ++ AEEKQ Y++ +
Sbjct: 553 KDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMTAEEKQPYVEQSQ 612
Query: 520 QDKERYVKECAEYK 561
DK+RY +E A Y+
Sbjct: 613 VDKKRYAEESAAYR 626
>01_01_0605 +
4497308-4497472,4497719-4497904,4498898-4499003,
4499062-4499216,4499341-4499424,4499498-4499589,
4499729-4499837,4499944-4500030,4500153-4500245,
4501144-4501341,4501481-4501632,4501724-4501874,
4501975-4502073,4502159-4502326,4502624-4502702,
4502870-4503000
Length = 684
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
+D AP++ +T ++ F R ++ PDL E+ ++L W ++ EEKQ Y+ +
Sbjct: 594 KDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQKMTGEEKQPYIQQSQ 653
Query: 520 QDKERYVKECAEYK 561
DK+RY KE A Y+
Sbjct: 654 VDKKRYEKESAVYR 667
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P YV + ++ ++++ + PD F E++ L ++W L AEEKQ Y + Q+KE Y
Sbjct: 158 KKPCPAYVLWCKDQWNEIKKESPDADFKEVSNALGAKWKALGAEEKQPYEERYRQEKEAY 217
Query: 538 VKECAEYKR-TNAYKEFTKQQ 597
++ + KR A K ++Q
Sbjct: 218 LQVVGQEKREAEAMKLLEEEQ 238
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
AA D P++P + ++ F E R QL ++P + + LT ++ +W L EKQ +
Sbjct: 407 AAADPNRPKKPASSFLLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGK 466
Query: 514 ADQDKERYVKECAEYKRTNA 573
A + Y ++ EY + A
Sbjct: 467 AAEAMAAYKRDMEEYTKAAA 486
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/97 (23%), Positives = 49/97 (50%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
+D + P+QP++ Y + +RR L A++ ++ E+ R EW + EK + AA
Sbjct: 280 KDPSKPKQPMSAYFVYTQQRRAALVAEKKNV--PEIGRITGEEWKAMSEAEKAPFEAAAR 337
Query: 520 QDKERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSKK 630
+ +E Y E A Y++ + +++ + + + K+
Sbjct: 338 KQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKIMKQ 374
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
RD PR + Y F E+ +L+A P E +R + W+RL A++K Y +
Sbjct: 222 RDPAQPRPNRSAYNFFFKEKHPELKATHPHRE-REYSRMIGDAWNRLAADDKMVYYRHSA 280
Query: 520 QDKERYVKECAEY 558
+DKERY +E EY
Sbjct: 281 EDKERYKREMQEY 293
>02_05_0261 +
27243898-27243938,27244068-27244157,27244293-27244350,
27244441-27244485,27244778-27244855,27244940-27245041,
27245150-27245173
Length = 145
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 355 PRQPLTGYVRFLNERRDQLRAQQPD-LGFAELTRQLASEWSRLPAEEKQQYLDAADQDKE 531
P++P + + F++E R + +A PD A +++ +W + +EK Y+D A Q K+
Sbjct: 33 PKRPPSAFFVFMSEFRQEYQAAHPDNKSVAAVSKAAGEKWRAMSEQEKAPYVDKAGQKKQ 92
Query: 532 RYVKECAEY-KRTNAYKEFTKQQSDLQDGSLSK 627
Y K A + K+ + + K D + SK
Sbjct: 93 DYEKTKANFDKKESTSSKKAKTHDDGEGSDKSK 125
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +1
Query: 343 DTTAPRQPLTGYVRFLNERRDQLRAQQPDL-GFAELTRQLASEWSRLPAEEKQQYLDAAD 519
D P++P T + F+ + R + + P + E+ + +W+ + EE+ +Y D A
Sbjct: 45 DRRRPKKPPTAFFYFMEDFRKTYKEENPSVKSMQEVGKACGEKWNTMTFEERVKYYDIAT 104
Query: 520 QDKERYVKECAEYKRTNAYKEFTKQ 594
+ + Y K AE+ + E +++
Sbjct: 105 EKRAEYEKAVAEFDKKKESGELSEE 129
>02_03_0176 +
16010806-16011095,16011983-16012061,16012389-16012464,
16012541-16012630,16012878-16013031,16013172-16013181,
16013240-16013407,16014087-16014485,16014580-16014990
Length = 558
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/108 (23%), Positives = 49/108 (45%)
Frame = +1
Query: 343 DTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQ 522
D P+ +GY F ++ +L+ + P +++ + W+ L E+K Y + +
Sbjct: 372 DPNHPKPNRSGYNFFFQDQHRKLKPEYPGQDRL-ISKMIGERWNNLGPEDKAVYQEKGVE 430
Query: 523 DKERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQVDASVS 666
DK RY ++ A Y+ + + Q L +K + +VD+ VS
Sbjct: 431 DKARYQRQLALYREQRTGQPISNAVPIQQ--RLPQKEVTIDEVDSKVS 476
>08_01_0008 -
65366-65497,65588-65759,65846-65972,66058-66140,
66232-66329
Length = 203
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPD-LGFAELTRQLASEWSRLPAEEKQQYLDAADQDKER 534
++P T + F+++ R + +A+ PD + + ++ W + E+K+ YLD A + K
Sbjct: 93 KRPPTAFFLFMSDFRKEYKAEHPDNKSVSAVAKEGGERWKSMSDEDKKPYLDKAAELKAE 152
Query: 535 Y 537
Y
Sbjct: 153 Y 153
>04_04_0814 +
28266590-28266615,28266780-28266860,28266986-28267043,
28267143-28267187,28268653-28268721,28268821-28268931,
28269038-28269046
Length = 132
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 355 PRQPLTGYVRFLNERRDQLRAQQPDL-GFAELTRQLASEWSRLPAEEKQQYLDAADQDKE 531
P++ LT + FL E R Q + P+ G A +T+ +W + EEK QY D E
Sbjct: 25 PKRGLTPFFAFLAEFRPQYMEKHPNTKGVAAVTKAAGEKWRAMSDEEKAQY-GGKKPDGE 83
Query: 532 RYVKECAEYKRTNAYKEFTKQQSDLQDGSLSKK 630
++ K + + K+ K Q+G S K
Sbjct: 84 SKPAAASKKKESTSSKK-AKTDGAEQEGEGSDK 115
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 379 VRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEY 558
VR L E+ D +R + G L A E R+ E+K + + D +R VKE E
Sbjct: 327 VRLLKEKEDMVRLLKEKEGMINLKTVKAEETQRIEDEDKYRIIKEKDDALDRLVKEKEEM 386
Query: 559 KR 564
R
Sbjct: 387 IR 388
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +1
Query: 109 DSLKSDVVNTVNSEVQPINIE------KDPKPVTTDSSLTQVPIVSNVHVLAETPVAID 267
D LK +V S P+ + D K +TT++ Q + +NVH L P+ ID
Sbjct: 306 DQLKVEVTTVFGSAAPPLRVNLVQVLGSDSKVITTETKELQFDLDNNVHYLDIAPLKID 364
>04_04_0633 -
26771487-26771591,26771708-26771782,26771906-26771981,
26772096-26772144,26772848-26773037,26773119-26773292,
26773415-26773543
Length = 265
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 334 AARDTTAPRQPL-TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLP 483
+A T+ RQ + + Y RF+ + +++A PD+ E A W+ P
Sbjct: 161 SANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFP 211
>06_01_0293 -
2139421-2139600,2139716-2140471,2140830-2140935,
2140999-2141249,2141342-2141443,2141557-2141876,
2142350-2142546,2143668-2143786,2143876-2143997,
2144877-2145081
Length = 785
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +1
Query: 376 YVRFLNE--RRDQLRAQQP--DLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVK 543
+++ LNE +++ L A Q LG ++ ++ + + L E+ ++ + +++++ +
Sbjct: 337 HLQKLNELAQKESLDANQKLHKLGIQDIEDEIKLKETELTEEKVRRLIRKKEREEQEVAR 396
Query: 544 ECAEYKRTNAYKEFTKQQSDLQDGSLSK 627
+ + NA E TKQ + Q+G +K
Sbjct: 397 REDQLRNENAESEATKQSNGNQEGDENK 424
>03_05_0506 +
25010059-25010089,25010606-25010654,25010812-25010887,
25011450-25011560
Length = 88
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLP 483
+ Y RF+ E +++A PD+ E A W+ P
Sbjct: 20 SAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFP 57
>12_02_1152 +
26515422-26515460,26516317-26516454,26518647-26518809,
26519165-26519213,26519315-26519390,26520348-26520473
Length = 196
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLP 483
+ Y RF+ E +++A PD+ E A W+ P
Sbjct: 123 SAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYP 160
>04_04_1668 + 35217254-35218531
Length = 425
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 337 ARDTTAPRQPLTGYVR-FLNERRDQLRAQQPD 429
A D+++ PLT + R FL+ RRDQ+ PD
Sbjct: 3 ATDSSSAAAPLTSFGRSFLSHRRDQIPPPPPD 34
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLP 483
+ Y RF+ + +++A PD+ E A W+ P
Sbjct: 197 SAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFP 234
>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
Length = 1211
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 92 LLQYIQHNTITILKHFNIGFWFKLSRKXGI 3
L QY+ +N TI +HF++ W +SRK +
Sbjct: 229 LAQYV-YNDKTIQEHFDVTMWVCISRKLDV 257
>04_04_1651 -
35057525-35057680,35058302-35058311,35058429-35058569,
35058675-35058784,35058907-35059006,35059108-35059308,
35059674-35059879,35060504-35060716,35060785-35060923,
35061370-35061606,35061688-35061893,35062664-35062759,
35062900-35063040
Length = 651
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 355 PRQPLTGYVRFLNERRDQ-LRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDK- 528
P Q T VR +E D+ LR+ L + TR+ E + P E Q +LDA D+ +
Sbjct: 45 PIQVRTHAVRTAHENIDRTLRSADVILTQFDRTREAEREIQKGPHENLQGFLDAVDRLRS 104
Query: 529 -ERYVKECAEYKRTN 570
ER+ Y+ ++
Sbjct: 105 IERFFSSNRSYRSSD 119
>02_05_0104 -
25858414-25858509,25858711-25858782,25859081-25859156,
25859286-25859334,25859826-25860012,25860164-25860340,
25860519-25860632
Length = 256
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLP 483
+ Y RF+ + +++A PD+ E A W+ P
Sbjct: 169 SAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFP 206
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,681,835
Number of Sequences: 37544
Number of extensions: 293851
Number of successful extensions: 947
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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