Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D22
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 57 1e-08
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 55 5e-08
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 55 5e-08
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 55 5e-08
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 55 5e-08
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 48 5e-06
AL110490-14|CAB54448.2| 95|Caenorhabditis elegans Hypothetical... 47 1e-05
AF056576-1|AAC78598.1| 95|Caenorhabditis elegans high mobility... 47 1e-05
U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian ... 46 2e-05
U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein... 45 7e-05
Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 44 2e-04
AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior pha... 44 2e-04
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 42 5e-04
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 42 6e-04
Z99171-6|CAB16309.2| 128|Caenorhabditis elegans Hypothetical pr... 38 0.010
U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian ... 35 0.054
U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defe... 34 0.12
U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defe... 34 0.12
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 34 0.12
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 34 0.12
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 34 0.12
U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.22
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 33 0.22
Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 31 1.2
AB038044-1|BAB62394.1| 852|Caenorhabditis elegans N-deacetylase... 30 1.5
AB037942-1|BAB61757.1| 814|Caenorhabditis elegans N-deacetylase... 30 1.5
AB037941-1|BAB61756.1| 826|Caenorhabditis elegans N-deactylase/... 30 1.5
AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical ... 29 2.7
AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical ... 29 2.7
AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical ... 29 2.7
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 29 2.7
AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein. 29 2.7
AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein. 29 2.7
AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein. 29 2.7
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 29 2.7
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 28 6.2
Z68006-2|CAA91996.1| 560|Caenorhabditis elegans Hypothetical pr... 28 8.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.2
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Frame = +1
Query: 343 DTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQ 522
D AP++ +GYV F+ RR + + E+ LA++W +L AEE+ + AD+
Sbjct: 123 DPNAPKRNRSGYVHFIIHRRASY--SKAVMSQREINISLAADWQKLTAEERIPFQQRADE 180
Query: 523 DKERYVKECAEYKRTNAYKEFTKQQ----SDLQDGSLSKKLRQVPQVD 654
+K +Y++ EYK+T+++KEF K++ S +GS + K R+ D
Sbjct: 181 EKVKYLELMEEYKKTDSHKEFQKKRAKFLSSQSNGSKNAKKRRQADSD 228
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 683 PIFTDQFLQHNKLRESELRQL 745
PIFT +F+ +NK R++ RQL
Sbjct: 266 PIFTPEFMTYNKTRDTYRRQL 286
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
+D P++ T Y+ + N R+ ++ LG ++ ++ ++W + A++K+++ D A
Sbjct: 556 KDPNEPKRATTAYIIWFNANRNSMKEDGDTLG--DVAKKAGAKWKSMSADDKKEWNDKAA 613
Query: 520 QDKERYVKECAEYKRTNAYKE-----FTKQQSDLQDGSLSKKLRQVPQVDAS 660
QDK RY E EYK+ E TK+ SD G K + D S
Sbjct: 614 QDKARYEAEMKEYKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHISDTDDS 665
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
A +D AP++ L+ + + ++R +++A PD ++ ++L W +P E K Y
Sbjct: 127 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQK 186
Query: 514 ADQDKERYVKECAEYK 561
A DK+RY E YK
Sbjct: 187 AQADKDRYADEMRNYK 202
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 442 ELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKE--CAEYKRTNAYKEFTKQQSD 603
E++++ + +W + +EK+++ + A +D ERY E A Y +A ++ + + D
Sbjct: 75 EISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMRKRKRAKKD 130
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
A +D AP++ L+ + + ++R +++A PD ++ ++L W +P E K Y
Sbjct: 126 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQK 185
Query: 514 ADQDKERYVKECAEYK 561
A DK+RY E YK
Sbjct: 186 AQADKDRYADEMRNYK 201
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 442 ELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYKRTNAYKEFTKQQSD 603
E++++ + +W + +EK+++ + A +D ERY E A Y +A ++ + + D
Sbjct: 76 EISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVAAYGGEDAMRKRKRAKKD 129
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
A +D AP++ L+ + + ++R +++A PD ++ ++L W +P E K Y
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQK 187
Query: 514 ADQDKERYVKECAEYK 561
A DK+RY E YK
Sbjct: 188 AQADKDRYADEMRNYK 203
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 442 ELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKE--CAEYKRTNAYKEFTKQQSD 603
E++++ + +W + +EK+++ + A +D ERY E A Y +A ++ + + D
Sbjct: 76 EISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMRKRKRAKKD 131
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
A +D AP++ L+ + + ++R +++A PD ++ ++L W +P E K Y
Sbjct: 128 AKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQK 187
Query: 514 ADQDKERYVKECAEYK 561
A DK+RY E YK
Sbjct: 188 AQADKDRYADEMRNYK 203
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 442 ELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKE--CAEYKRTNAYKEFTKQQSD 603
E++++ + +W + +EK+++ + A +D ERY E A Y +A ++ + + D
Sbjct: 76 EISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMRKRKRAKKD 131
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/87 (22%), Positives = 50/87 (57%)
Frame = +1
Query: 340 RDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAAD 519
+D AP++ + Y+++ R++L+ + A++ ++ ++W + +++K+++ + A+
Sbjct: 551 KDPNAPKRATSAYMQWFLASRNELKEDGDSV--ADVAKKGGAKWKTMSSDDKKKWEEKAE 608
Query: 520 QDKERYVKECAEYKRTNAYKEFTKQQS 600
+DK RY KE EY++ +K S
Sbjct: 609 EDKSRYEKEMKEYRKNGPPSSSSKPSS 635
>AL110490-14|CAB54448.2| 95|Caenorhabditis elegans Hypothetical
protein Y48B6A.14 protein.
Length = 95
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +1
Query: 337 ARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAA 516
A+D AP++ ++ + ++ E R++++ +P +G A++ + EW +L +K ++ A
Sbjct: 22 AKDPNAPKRAMSAFFFWMQENRERIK--KPGMGVADVAKAAGVEWGKLT--DKSRWEKKA 77
Query: 517 DQDKERYVKECAEYKRT 567
DK+RY + A YK++
Sbjct: 78 ADDKKRYEVDIANYKKS 94
>AF056576-1|AAC78598.1| 95|Caenorhabditis elegans high mobility
group protein 1.1 protein.
Length = 95
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +1
Query: 337 ARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAA 516
A+D AP++ ++ + ++ E R++++ +P +G A++ + EW +L +K ++ A
Sbjct: 22 AKDPNAPKRAMSAFFFWMQENRERIK--KPGMGVADVAKAAGVEWGKLT--DKSRWEKKA 77
Query: 517 DQDKERYVKECAEYKRT 567
DK+RY + A YK++
Sbjct: 78 ADDKKRYEVDIANYKKS 94
>U80032-3|AAM15556.1| 404|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 1 protein.
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + R ++ QPD+ AE+++QL S W L EEK ++ A++ + +
Sbjct: 94 KRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAERLRVCH 153
Query: 538 VKECAEYKRTNAYKEFTKQQSDLQDGSLSKKLR-QVPQ 648
++E +YK YK K + + DG+L + + Q PQ
Sbjct: 154 MQEYPDYK----YKPRKKPKKN-PDGTLQQPAQPQAPQ 186
>U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein
protein.
Length = 438
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQ--QPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKE 531
++PL +V F+ E R L + + AEL ++L W L EE+ +Y + A +DKE
Sbjct: 193 KKPLNAFVWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKE 252
Query: 532 RYVKECAEYKRTNAYKEFTKQQSDLQDGSL 621
+ + E+ Y K+ +D S+
Sbjct: 253 THKERYPEWSARENYAVNKKKTKKRRDKSI 282
>Z69792-4|CAA93665.1| 212|Caenorhabditis elegans Hypothetical
protein F40E10.2 protein.
Length = 212
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/68 (23%), Positives = 42/68 (61%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + +R ++ P + +E++++L +EW +L +EK+ ++D A + + +
Sbjct: 49 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALH 108
Query: 538 VKECAEYK 561
+KE +YK
Sbjct: 109 MKEHPDYK 116
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/68 (23%), Positives = 42/68 (61%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + +R ++ + P + +E++++L +EW L +EK+ ++D A + + +
Sbjct: 61 KRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIH 120
Query: 538 VKECAEYK 561
+KE +YK
Sbjct: 121 MKEHPDYK 128
>AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior
pharynx defect protein 1 protein.
Length = 437
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQ--QPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKE 531
++PL ++ F+ E R L + + AEL ++L W L EE+ +Y + A +DKE
Sbjct: 192 KKPLNAFMWFMKENRKALLEEIGNNEKQSAELNKELGKRWHDLSKEEQAKYFEMAKKDKE 251
Query: 532 RYVKECAEYKRTNAYKEFTKQQSDLQDGSL 621
+ + E+ Y K+ +D S+
Sbjct: 252 THKERYPEWSARENYAVNKKKTKKRRDKSI 281
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQY 504
+GY+ F E R ++ + PD GF E+++ + EW +L E+K+ Y
Sbjct: 1454 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHY 1498
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQY 504
+GY+ F E R ++ + PD GF E+++ + EW +L E+K+ Y
Sbjct: 1454 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHY 1498
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQY 504
+GY+ F E R ++ + PD GF E+++ + EW +L E+K+ Y
Sbjct: 84 SGYILFSAEVRKRIMHENPDAGFGEVSKIVGIEWKKLSEEQKKHY 128
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +1
Query: 334 AARDTTAPRQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDA 513
++R P +PL Y+R+ + ++RA+ P+ ++ + + W LP EK Y
Sbjct: 19 SSRGPKVPERPLQPYMRYSRKMWPKVRAENPEAQLWDIGKMIGKYWLDLPDGEKSHYQHE 78
Query: 514 ADQDKERYVKECAEYK 561
+ +K Y K+ ++
Sbjct: 79 YELEKADYEKQMKHFQ 94
>Z99171-6|CAB16309.2| 128|Caenorhabditis elegans Hypothetical
protein F47G4.6 protein.
Length = 128
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +1
Query: 370 TGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKEC 549
+ Y F ER+ + P F ++++++A +W L EEK+ Y +++++ +
Sbjct: 54 SAYALFFRERQSLEKRAAPYATFGQISQKIARQWDSLTEEEKKAYKQRCEKNRKTSIANA 113
Query: 550 AEYK 561
E K
Sbjct: 114 VEEK 117
>U38377-2|AAN72421.1| 199|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform b protein.
Length = 199
Score = 35.1 bits (77), Expect = 0.054
Identities = 13/41 (31%), Positives = 28/41 (68%)
Frame = +1
Query: 439 AELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYK 561
+E++++L +EW L +EK+ ++D A + + ++KE +YK
Sbjct: 4 SEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYK 44
>U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying
defective protein 13,isoform d protein.
Length = 319
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/68 (17%), Positives = 36/68 (52%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + + R ++ PD+ + +++ L S W + EKQ Y + + + +
Sbjct: 179 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 238
Query: 538 VKECAEYK 561
+++ +Y+
Sbjct: 239 MEQHPDYR 246
>U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying
defective protein 13,isoform b protein.
Length = 316
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/68 (17%), Positives = 36/68 (52%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + + R ++ PD+ + +++ L S W + EKQ Y + + + +
Sbjct: 176 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 235
Query: 538 VKECAEYK 561
+++ +Y+
Sbjct: 236 MEQHPDYR 243
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/68 (17%), Positives = 36/68 (52%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + + R ++ PD+ + +++ L S W + EKQ Y + + + +
Sbjct: 282 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 341
Query: 538 VKECAEYK 561
+++ +Y+
Sbjct: 342 MEQHPDYR 349
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/68 (17%), Positives = 36/68 (52%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + + R ++ PD+ + +++ L S W + EKQ Y + + + +
Sbjct: 330 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 389
Query: 538 VKECAEYK 561
+++ +Y+
Sbjct: 390 MEQHPDYR 397
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/68 (17%), Positives = 36/68 (52%)
Frame = +1
Query: 358 RQPLTGYVRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERY 537
++P+ ++ + + R ++ PD+ + +++ L S W + EKQ Y + + + +
Sbjct: 330 KRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLSKLH 389
Query: 538 VKECAEYK 561
+++ +Y+
Sbjct: 390 MEQHPDYR 397
>U51998-8|AAA96081.2| 241|Caenorhabditis elegans Hypothetical
protein C12D12.5 protein.
Length = 241
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 394 ERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEY-KRTN 570
+RR Q+ A +++++ L +EW ++ EK +++ A Q +E + +Y R
Sbjct: 115 QRRQQIAATGQKFHNSDISKMLGAEWRKMEEHEKVPFVERAKQLREEHFNAHPDYVYRPR 174
Query: 571 AYKEFTKQQSDLQDGSLSKKLRQVPQVDAS 660
K K + S + + V ++S
Sbjct: 175 RRKRVEKSAGSVDSNSADEITKPVNVYNSS 204
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 597 LLFCELFISICSFVFRTFFN-ISFFILICSI*VLLFFFSWKSTPL 466
+L C L I F F F N + FILIC I + FFF+ PL
Sbjct: 343 ILVCNLIIFALMFTFYKFENHVLGFILICFICIFTFFFALGPGPL 387
>Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical
protein T24F1.3b protein.
Length = 554
Score = 31.1 bits (67), Expect = 0.88
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 529 ERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQVDASVSG--*NGNTNLHRPI 702
ERYVKE ++ T+ YKE ++ SL+K + D G + N NL RPI
Sbjct: 253 ERYVKEDTPFEWTDEYKEMDLERKIHSYNSLAKGMEITLHEDGVNFGGHIHVNMNLSRPI 312
Query: 703 S 705
S
Sbjct: 313 S 313
>Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical
protein T24F1.3a protein.
Length = 615
Score = 31.1 bits (67), Expect = 0.88
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 529 ERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSKKLRQVPQVDASVSG--*NGNTNLHRPI 702
ERYVKE ++ T+ YKE ++ SL+K + D G + N NL RPI
Sbjct: 314 ERYVKEDTPFEWTDEYKEMDLERKIHSYNSLAKGMEITLHEDGVNFGGHIHVNMNLSRPI 373
Query: 703 S 705
S
Sbjct: 374 S 374
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +2
Query: 398 EEISCEHNSQIWVLQN*PDS*LASGVDFQLKKNNNT*MLQIRIKKDMLKNVRNTKEQMLI 577
EE++ EH ++ +L+ D G ++++ ++ IKKD NTK + ++
Sbjct: 43 EELAAEHKDRLSILKIDVDECDGVGEEYEINSMPTFLLIVDGIKKDQFSGANNTKFEEMV 102
Query: 578 KSS 586
K++
Sbjct: 103 KAA 105
>AB038044-1|BAB62394.1| 852|Caenorhabditis elegans
N-deacetylase/N-sulfotransferase protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 379 VRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEY 558
++ LN ++ Q +A+ LT +S + E +YL+ A +++ K C EY
Sbjct: 94 IQILNSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYYKYLNMAQWNRQLLDKYCKEY 153
Query: 559 K 561
+
Sbjct: 154 R 154
>AB037942-1|BAB61757.1| 814|Caenorhabditis elegans
N-deacetylase/N-sulfotransferase protein.
Length = 814
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 379 VRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEY 558
++ LN ++ Q +A+ LT +S + E +YL+ A +++ K C EY
Sbjct: 56 IQILNSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYYKYLNMAQWNRQLLDKYCKEY 115
Query: 559 K 561
+
Sbjct: 116 R 116
>AB037941-1|BAB61756.1| 826|Caenorhabditis elegans
N-deactylase/N-sulfotransferase protein.
Length = 826
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 379 VRFLNERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEY 558
++ LN ++ Q +A+ LT +S + E +YL+ A +++ K C EY
Sbjct: 68 IQILNSQKLQFKAEAVSKNLPVLTTSRRGRYSLIIIENYYKYLNMAQWNRQLLDKYCKEY 127
Query: 559 K 561
+
Sbjct: 128 R 128
>AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical
protein H38K22.5c protein.
Length = 562
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical
protein H38K22.5b protein.
Length = 617
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical
protein H38K22.5a protein.
Length = 618
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 109 DSLKSDVVNTVNSEVQPINIEKDPKPVTTDSSLTQVPIVSNVHVLAETP 255
D+++SD + + P DP P T+ SSLTQ P SN ++ P
Sbjct: 470 DAVESDSDDVPAPQSPPTPSPADPGPTTSSSSLTQDP-ASNATGFSDVP 517
>AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein.
Length = 562
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein.
Length = 617
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein.
Length = 618
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 526 YPD-LQHLSIVVFLQLEVYSTR*LTVWSIL-QNPN--LAVVLATDLFSHLKIL 380
YPD L S+++ E YST TVWS++ ++P L ++ D FS + L
Sbjct: 152 YPDNLPTTSVIIVYHNEAYSTLLRTVWSVIDRSPKELLKEIILVDDFSDREFL 204
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 109 DSLKSDVVNTVNSEVQPINIEKDPKPVTTDSSLTQVPIVSNVHVLAETP 255
D+++SD + + P DP P T+ SSLTQ P SN ++ P
Sbjct: 470 DAVESDSDDVPAPQSPPTPSPADPGPTTSSSSLTQDP-ASNATGFSDVP 517
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 112 SLKSDVVNTVNSEVQPINIEKDPKPVTTDSSLTQVPIVSNVHVLAETPVAIDTAGA 279
SL++ V+ + + PI++E ++T S LT PI+ + V ++ + TA A
Sbjct: 306 SLETTVIRP--TPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 112 SLKSDVVNTVNSEVQPINIEKDPKPVTTDSSLTQVPIVSNVHVLAETPVAIDTAGA 279
SL++ V+ + + PI++E ++T S LT PI+ + V ++ + TA A
Sbjct: 308 SLETTVIRP--TPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 361
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 112 SLKSDVVNTVNSEVQPINIEKDPKPVTTDSSLTQVPIVSNVHVLAETPVAIDTAGA 279
SL++ V+ + + PI++E ++T S LT PI+ + V ++ + TA A
Sbjct: 306 SLETTVIRP--TPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 394 ERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYKRTNA 573
+RR + +A++ D T+QL E L EEKQ++ ++ + KE+ + + + ++
Sbjct: 304 KRRLEEKAKEQDSHNVYRTKQLHKE---LDEEEKQRHEESEVRKKEKLINKLTKRQQLGK 360
Query: 574 YKEFTKQQSDLQDGSLSKKLRQV-PQ 648
K + L L+ LRQ+ PQ
Sbjct: 361 GKFVDAEDPFLLQEELTGNLRQLKPQ 386
>Z68006-2|CAA91996.1| 560|Caenorhabditis elegans Hypothetical
protein K09C8.3 protein.
Length = 560
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 467 SGVDFQLKKNNNT*MLQI-RIKKDMLKNVRNTKEQMLIKSSQNNNLICKMVAYQRS 631
SG++ LK N +Q +I + N+RN +QM K Q N+ K +++
Sbjct: 173 SGINSDLKNALNGIQVQFGQISQQFANNIRNICQQMNCKQQQQKNVQMKQAILKQT 228
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 427 DLGFAELTRQLASEWSRLPAEEKQQYLDAAD-QDKERYVKECAEYKRTNAYKEFTKQQSD 603
D A T+Q A E S+L A+EK + + D KE+ + + + + A K+ + +
Sbjct: 13220 DAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIATKKASADKLK 13279
Query: 604 LQDGSLSKKLRQV 642
L++ + +KK +V
Sbjct: 13280 LEEQAQAKKAAEV 13292
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 427 DLGFAELTRQLASEWSRLPAEEKQQYLDAAD-QDKERYVKECAEYKRTNAYKEFTKQQSD 603
D A T+Q A E S+L A+EK + + D KE+ + + + + A K+ + +
Sbjct: 13220 DAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIATKKASADKLK 13279
Query: 604 LQDGSLSKKLRQV 642
L++ + +KK +V
Sbjct: 13280 LEEQAQAKKAAEV 13292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,405,229
Number of Sequences: 27780
Number of extensions: 298307
Number of successful extensions: 1103
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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