Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D20
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 204 1e-53
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 99 3e-22
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 94 2e-20
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 94 2e-20
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 86 4e-18
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 81 2e-16
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 79 6e-16
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 66 6e-12
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 27 2.0
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 27 2.6
SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces po... 26 4.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.5
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c... 26 4.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 6.0
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 26 6.0
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 25 7.9
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 25 7.9
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.9
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 204 bits (497), Expect = 1e-53
Identities = 97/207 (46%), Positives = 142/207 (68%), Gaps = 1/207 (0%)
Frame = +2
Query: 80 MFSGLEAAVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEH 259
+ G+E AV N NA ++ ++ R++ GPNG NK+++NH+ + F+T+DA TIIREL+V H
Sbjct: 20 IMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIH 79
Query: 260 PAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCL 439
PAAKL+V A+Q Q+ E+GD NFV+V +G R+G+T EIA GYE AL +
Sbjct: 80 PAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTM 139
Query: 440 EILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILP-EKTTFNV 616
E+L + ++I+ ++ KE+ K I I SKQYG+E F+S+LV KA + +LP + + FNV
Sbjct: 140 EVLEEICADKIETVESEKELIKAIRTCISSKQYGNEDFLSDLVAKAILTVLPKDPSKFNV 199
Query: 617 DNVRVCKILGAGLLQSEVLSGMVFXRE 697
DN+RV KI+G+ L S+V+ GMVF RE
Sbjct: 200 DNIRVVKIMGSSLYNSQVVKGMVFPRE 226
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 99 bits (238), Expect = 3e-22
Identities = 58/195 (29%), Positives = 109/195 (55%), Gaps = 4/195 (2%)
Frame = +2
Query: 110 SNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 289
SNI A + A ++R++ GP GM+KMI + +T+D TI++ L V HPAAK++V S
Sbjct: 23 SNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLS 82
Query: 290 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL-PSLICN 466
QD E GDGT V++L+G + G+ + IA+ ++RA ++ + + +
Sbjct: 83 AAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAI 142
Query: 467 EIKDTKN-IKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVD--NVRVCK 637
E+ D ++ ++ T + + I+S QY + ++ + A + ++ + NVD ++R+ K
Sbjct: 143 ELSDRESLLRAATTSLNSKIVS-QYSN--LLAPIAVDAVLKVIDPRVATNVDLKDIRIVK 199
Query: 638 ILGAGLLQSEVLSGM 682
LG + +E++ G+
Sbjct: 200 KLGGIIDDTELIPGL 214
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 94.3 bits (224), Expect = 2e-20
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Frame = +2
Query: 110 SNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 289
SNINAC ++R+ GP G +K++++ + +++D TI++ LD+ HPAAK +V +
Sbjct: 28 SNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIA 87
Query: 290 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICN- 466
+ QDAEVGDGT V+V +G GV++ I GY +A + + + +
Sbjct: 88 RAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHL 147
Query: 467 EIKDTKNIKE-VTKGIVAAIMSKQY-GHEQFISELVTKACVAILPEKTTFNVDNVRVCKI 640
++ D +++ +TK A+ SK + F +++V A + + ++ N + + + K+
Sbjct: 148 DLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL--DQEDLNENMIGIKKV 205
Query: 641 LGAGLLQSEVLSGMVFXR 694
G + S ++ G+ F +
Sbjct: 206 PGGAMEDSLLVKGVAFKK 223
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 93.9 bits (223), Expect = 2e-20
Identities = 59/204 (28%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Frame = +2
Query: 101 AVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 280
AV S+I A K A VR++ GP G++K++I+ + VT+D TI+ +++VEH AKL+V
Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 281 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALD---KCLEILP 451
S+ QD E+GDGT V+VL+G G+ IADGYE+A K L+ +
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAIS 154
Query: 452 SLICNEIKDTKNI-KEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVR 628
++ ++T N+ + + + ++SK H+ F + V ++ + + ++
Sbjct: 155 DVVDFSPENTTNLFRSAKTSLGSKVVSK--AHDHFANIAVDAVLSVADLQRKDVDFELIK 212
Query: 629 VCKILGAGLLQSEVLSGMVFXREV 700
V +G + ++++ G+V +++
Sbjct: 213 VDGKVGGSVDDTKLVKGVVVDKDM 236
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 86.2 bits (204), Expect = 4e-18
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Frame = +2
Query: 113 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 292
N+ A A V+S+ GP G++KM+++ I VT+D TI+ LDVEHPA K++V +Q
Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQ 85
Query: 293 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 472
QD EVGDGT V++++ + + + I GY A+ + ++ + ++ +
Sbjct: 86 QQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSV 145
Query: 473 KDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTKACVAILPE----KTTFNVDNVRVCK 637
D+ + + ++ SK G++ F S + A +++ +T + V V + K
Sbjct: 146 -DSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILK 204
Query: 638 ILGAGLLQSEVLSG 679
G +S ++ G
Sbjct: 205 AHGKSSRESVLVKG 218
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 80.6 bits (190), Expect = 2e-16
Identities = 41/119 (34%), Positives = 65/119 (54%)
Frame = +2
Query: 101 AVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 280
A SNI A K A +R+ GP M KM+++ + +T+D I+RE++V HPAAK M+
Sbjct: 20 AQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMI 79
Query: 281 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 457
++ QD EVGDGT VI+L+G + + +++AL+ L I+ +
Sbjct: 80 ELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEI 138
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 79.0 bits (186), Expect = 6e-16
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Frame = +2
Query: 146 VRSAYGPNGMNKMIINHIDKQFV-TSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGT 322
V+S GP GM+K++ ++ V T+D TI++ + +++ AAK++V S++QD EVGDGT
Sbjct: 36 VKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGT 95
Query: 323 NFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVT 502
V V + + I DGY A ++ L + + D +
Sbjct: 96 TSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRASSIDNSSDPAKFRSDL 155
Query: 503 KGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVRVCKILGAGLLQSEVLSGM 682
+ I +S + Q + A A+L K + N+DN+++ KILG L S + G
Sbjct: 156 ENIARTTLSSKI-LSQNKNHFAQLAVDAVLRLKGSTNLDNIQIIKILGGKLDDSFLDEGF 214
Query: 683 VFXREV 700
+ + +
Sbjct: 215 ILNKTI 220
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 65.7 bits (153), Expect = 6e-12
Identities = 45/195 (23%), Positives = 88/195 (45%)
Frame = +2
Query: 101 AVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 280
A+ NI+A ++S GP G KM+++ +T D ++ E+ +++P A +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 281 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLI 460
A+ QD GDGT V +L G R G+ S I+DG+ A ++ L L S
Sbjct: 77 KAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFK 136
Query: 461 CNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVRVCKI 640
+ D + + V K ++ +S + + ++ V A + I ++ V + K+
Sbjct: 137 TDFEVDREVLLNVAKTSLSTKISSKV--VESLAPAVVDAILTIRRPDEPIDLHMVEIMKM 194
Query: 641 LGAGLLQSEVLSGMV 685
++++ G++
Sbjct: 195 QNRSASDTQLIRGLL 209
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 573 KPVLQYYQKKLHLMLIMLEYAKF*VLDCCNLRYFLEWYL 689
KP L Y ++ HL + + KF LD CN+ YF+ YL
Sbjct: 140 KPTLLYTNQRDHLDRLC-DQVKF-YLDQCNVEYFVAPYL 176
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 369 NYSAWE*LPVKLLMDMREHLTNVWKSFLLS 458
NYS WE + + L +R L N KSF+L+
Sbjct: 559 NYSLWEAVGISLNYIVRNGLINSHKSFVLT 588
>SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 467 EIKDTKNIK-EVTKGIVAAIMSKQYGHEQFISELV 568
E+ T NIK + ++G++ S QYG Q ISELV
Sbjct: 76 EVNVTFNIKADPSEGLLNFSQSLQYGQCQGISELV 110
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 684 TIPESTSDCNSPAPRILHTLTLSTLNVVFSGSIATQAFVTSS 559
++P S S S + TLT S +V ++G+ A TSS
Sbjct: 304 SVPSSVSSFTSSSSSYTTTLTASNTSVTYTGTGTGSATFTSS 345
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 684 TIPESTSDCNSPAPRILHTLTLSTLNVVFSGSIATQAFVTSS 559
++P S S S TLT S V F+G+ A TSS
Sbjct: 412 SVPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGSATFTSS 453
>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 159 YAERTLCANCLQALILLYTAASXPENIRA 73
+AER C NC L YT P I A
Sbjct: 65 FAERIFCKNCGTTLYFAYTNGKNPYFINA 93
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 699 TSRXNTIPESTSDCNSPAPRILHTLTLSTLNVVFSGSIATQAFVTSSEMNCS 544
TS P +TSD +P PR + T +++ +S S ++ +TSS + S
Sbjct: 119 TSSVACFPYATSDAPNPIPR-GDSATSTSIAPTYSASDSSATTITSSSPSTS 169
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 583 NTGFRDKLRNELFMTILFRHDSSNNTLCNFFNVF 482
N F + + E+ LF HD NN L N +F
Sbjct: 230 NAPFPNFISKEILHYYLFIHDEDNNDLSNSKQIF 263
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 7.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 233 WCQHHW*QIAYQY 195
W HHW Q+ YQ+
Sbjct: 421 WAVHHWKQMGYQF 433
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 486 FFVSFISLQMREGRISRHLSSALSYPSAISLVV 388
FF + + + R +RH++S L+YP +I ++
Sbjct: 120 FFYTRDFPKFQSSRTARHITSLLTYPMSIGAIL 152
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 318 PSPTSASCI*LASTISLAAGCSTSNSLMMVPASLVTNCLSI*LMIILFMPLGPYAERTLC 139
P PTSAS AS SL G N ++ +V + +++I+F L + +
Sbjct: 69 PEPTSASTPPSASASSLPNGAQKHNHTGVIAGPIVGVLGGLIVLVIIFYCLRHFKRKKFL 128
Query: 138 A 136
A
Sbjct: 129 A 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,687,984
Number of Sequences: 5004
Number of extensions: 50697
Number of successful extensions: 156
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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