Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D20
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 194 6e-50
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 96 3e-20
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 95 4e-20
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 95 6e-20
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 94 8e-20
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 91 6e-19
10_08_0620 - 19321612-19323237 77 2e-14
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 76 3e-14
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 64 8e-11
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 64 1e-10
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 61 7e-10
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 42 5e-04
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 40 0.002
07_03_1121 - 24130451-24130462,24130827-24131255 29 4.7
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 28 8.2
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 194 bits (473), Expect = 6e-50
Identities = 96/207 (46%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Frame = +2
Query: 86 SGLEAAVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPA 265
SGL+ AV NI+AC++ + R++ GPNGMNKM+INH+DK FVT+DA TI+ EL+V+HPA
Sbjct: 18 SGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPA 77
Query: 266 AKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEI 445
AK++VLA + Q E+GDG N I +G R+G+ SEI GY +A++K +EI
Sbjct: 78 AKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEI 137
Query: 446 LPSLI--CNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEK-TTFNV 616
L L+ +E D +N +EV + +A+ SKQ+G E + LV AC+ + P+ FNV
Sbjct: 138 LEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADACMQVCPKNPANFNV 197
Query: 617 DNVRVCKILGAGLLQSEVLSGMVFXRE 697
DNVRV K+LG GL S V+ GMV +
Sbjct: 198 DNVRVAKLLGGGLHNSSVVRGMVLKND 224
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 95.9 bits (228), Expect = 3e-20
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 3/202 (1%)
Frame = +2
Query: 98 AAVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 277
A V SNINAC A +VR+ GP GM+K+I + +++D TI+R LD+ HPAAK++
Sbjct: 23 AQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKIL 82
Query: 278 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 457
V ++ QD+EVGDGT V++L+ GV + Y A +E + L
Sbjct: 83 VDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDL 142
Query: 458 ICN-EIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKACVAILPEKTTFNVDNVR 628
+ E K + KE+ A +S + G ++F + +V A +AI + ++ +
Sbjct: 143 ATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAISNDD---RLNLLG 199
Query: 629 VCKILGAGLLQSEVLSGMVFXR 694
+ K+ G + S +++G+ F +
Sbjct: 200 IKKVPGGTMRDSFLVNGVAFKK 221
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 95.5 bits (227), Expect = 4e-20
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Frame = +2
Query: 107 YSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLA 286
++NI A K A +R+ GP M KM+++ VT+D I+RE+D+ HPAAK M+
Sbjct: 24 HANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHPAAKSMIEL 83
Query: 287 SQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICN 466
S+ QD EVGDGT VIVL+G + I Y +AL+ L +L + +
Sbjct: 84 SRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKIAMH 143
Query: 467 -EIKDTKNIKEVTKGIVAAIMSKQYGH--EQFISELVTKACVAILPEKTTFNVDN-VRVC 634
++ D + + K + + Q+G + T A V + ++ ++V
Sbjct: 144 VDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGMREVDIKKYIKVE 203
Query: 635 KILGAGLLQSEVLSGMVFXREV 700
K+ G L S VL G++F ++V
Sbjct: 204 KVPGGQLEDSRVLKGVMFNKDV 225
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 94.7 bits (225), Expect = 6e-20
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 2/206 (0%)
Frame = +2
Query: 89 GLEAAVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAA 268
GL+A +NI A K A+ +R++ GP GM+KM+ + +T+D TI+ ++DV++ A
Sbjct: 26 GLDAQK-ANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIA 84
Query: 269 KLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 448
KLMV S QD E+GDGT V+V++G G+ IA+GYE A + L
Sbjct: 85 KLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHL 144
Query: 449 PSLICNEIKDTKNIKEVTKGIVAAIMSKQYGH-EQFISELVTKACVAILP-EKTTFNVDN 622
+ NI+ + + + + SK ++ ++E+ KA +A+ E+ N+D
Sbjct: 145 EHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDL 204
Query: 623 VRVCKILGAGLLQSEVLSGMVFXREV 700
++V +G L +E++ G++ +++
Sbjct: 205 IKVEGKVGGKLEDTELVYGIIVDKDM 230
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 94.3 bits (224), Expect = 8e-20
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 4/202 (1%)
Frame = +2
Query: 107 YSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLA 286
++NI A K A +R+ GP M KM+++ VT+D I+RELD+ HPAAK M+
Sbjct: 24 HANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHPAAKSMIEL 83
Query: 287 SQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL-IC 463
S+ QD EVGDGT VIVL+G + I Y +ALD L +L + I
Sbjct: 84 SRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKIAIP 143
Query: 464 NEIKDTKNIKEVTKGIVAAIMSKQYGH--EQFISELVTKACVAILPEKTTFNVDN-VRVC 634
++ D + + K + + Q+G + T A V + ++ ++V
Sbjct: 144 VDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDATTTAGVDLGQGIREVDIKKYIKVE 203
Query: 635 KILGAGLLQSEVLSGMVFXREV 700
K+ G L S+VL G++ ++V
Sbjct: 204 KVPGGQLEDSKVLKGVMINKDV 225
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 91.5 bits (217), Expect = 6e-19
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 4/199 (2%)
Frame = +2
Query: 113 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 292
NI A + A +VR++ GP GM+KMI + + +T+D TI+ + + PAA+++ S+
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 293 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL-ICNE 469
QDA GDGT V+VL+G G + AD R + +E+L ++ I E
Sbjct: 91 SQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIE 150
Query: 470 IKDTKN-IKEVTKGIVAAIMSKQYGHEQFISELVTKACVAIL--PEKTTFNVDNVRVCKI 640
+ D + +K + + + ++S+ + +S L A ++++ ++ ++RV K
Sbjct: 151 LSDRDSLVKSASTALNSKVVSQ---YSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKK 207
Query: 641 LGAGLLQSEVLSGMVFXRE 697
LG + +E++ G++F ++
Sbjct: 208 LGGTVDDTELIRGLIFDKK 226
>10_08_0620 - 19321612-19323237
Length = 541
Score = 76.6 bits (180), Expect = 2e-14
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 8/203 (3%)
Frame = +2
Query: 113 NINACKQFAQSVRSAYGPNGMNKMIINHID----KQFVTSDAGTIIRELDVEHPAAKLMV 280
NI A + A + R++ GP GM+KMI + +T+D TI+ + + PAA+++
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 281 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL- 457
S+ QDA GDGT V+VL+G G + AD + +E+L +
Sbjct: 91 DLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMA 150
Query: 458 ICNEIKDTKN-IKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVD--NVR 628
I E+ D +K + + + ++S+ + +S L A +A++ + +D ++R
Sbjct: 151 IPVELSDRDALVKSASTALNSKVVSQ---YSTLLSPLAVDAALAVVDPAHPYLLDLRDIR 207
Query: 629 VCKILGAGLLQSEVLSGMVFXRE 697
V K LG + +E++ G+V ++
Sbjct: 208 VVKKLGCTVDDTELIRGLVLNKK 230
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 75.8 bits (178), Expect = 3e-14
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 4/192 (2%)
Frame = +2
Query: 137 AQSVRSAYGPNGMNKMI--INHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEV 310
A V++ GP GM+K++ VT+D TI++ L +++PAAK++V S++QD EV
Sbjct: 29 ADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEV 88
Query: 311 GDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNI 490
GDGT V+VL+G + + I GY A++ L + ++
Sbjct: 89 GDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDKF 148
Query: 491 KEVTKGIVAAIMSKQY--GHEQFISELVTKACVAILPEKTTFNVDNVRVCKILGAGLLQS 664
+ I +S + +++ +EL A A+L K + N++ +++ KI G L S
Sbjct: 149 RSDLMNIAMTTLSSKILSQDKEYFAEL---AVDAVLRLKGSTNLEAIQILKIPGGSLKDS 205
Query: 665 EVLSGMVFXREV 700
+ G + +++
Sbjct: 206 FLDEGFILDKKI 217
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 64.5 bits (150), Expect = 8e-11
Identities = 37/154 (24%), Positives = 69/154 (44%)
Frame = +2
Query: 98 AAVYSNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 277
AA++ NINA K +++ GP G KM++ +T D T+++E+ +++P A ++
Sbjct: 17 AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMI 76
Query: 278 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 457
+ QD GDGT ++ G G + DG++ A LE L
Sbjct: 77 ARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKF 136
Query: 458 ICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFIS 559
+ + + +E+ K I + + G F++
Sbjct: 137 KTSVVMGDEPDREILKMIARTTLRTKVGAVCFLA 170
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = +2
Query: 182 MIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXX 361
M+++ I +T+D TI+R L+VEHPAAK++V +++QD EVGDGT V++++
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 362 XXXXXRLGVTTSEIADGY 415
R + + I GY
Sbjct: 61 GNDLVRNKIHPTSIISGY 78
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = +2
Query: 146 VRSAYGPNGMNKMI--INHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDG 319
V++ GP GM+K++ VT+D TI++ L +++PAAK++V S++QD EVGDG
Sbjct: 33 VKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDG 92
Query: 320 TNFVIVLSG 346
T V+VL+G
Sbjct: 93 TTSVVVLAG 101
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +2
Query: 131 QFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPA----AKLMVLASQMQ 298
+ A V GP G N ++ + + +D T+ RE+++E P AKL+ A+
Sbjct: 78 KLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKT 137
Query: 299 DAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKD 478
+ GDGT +VL+ G +I G E+ +E L L E++D
Sbjct: 138 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKL-SKEVED 196
Query: 479 TK 484
++
Sbjct: 197 SE 198
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 119 NACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPA----AKLMVLA 286
N + A V GP G N ++ + + +D T+ +E+++E P AKL+ A
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 129
Query: 287 SQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICN 466
+ + GDGT +VL+ G +I G E+ + L +
Sbjct: 130 AAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQKM-SK 188
Query: 467 EIKDTK 484
E++D++
Sbjct: 189 EVEDSE 194
>07_03_1121 - 24130451-24130462,24130827-24131255
Length = 146
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 225 ASLVTNCLSI*LMIILFMPLGPYAERTLCANCL 127
A+ TNC ++ + + ++ +GP R +CA C+
Sbjct: 24 AATTTNCCAVCVEPLEWVAIGPCGHRCVCARCI 56
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 681 IPESTSDCNSPAPRILHTLTLSTLNVVFSGSIAT 580
+P+S C SP PR+ + T S + VFSG +++
Sbjct: 859 LPKSNGSCLSPIPRVQSSSTHSQTS-VFSGGLSS 891
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,281,274
Number of Sequences: 37544
Number of extensions: 319157
Number of successful extensions: 818
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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