Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D16
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   1.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   3.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   5.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   5.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   5.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    20   5.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    20   5.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 90  RKPRHASTLGMDPKFLRNQRFCKXGNLKP 176
           ++P+H S + +DPKF  ++ + +   + P
Sbjct: 17  QQPQHISGVVVDPKFPPSEEYNQNSYIPP 45


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 90  RKPRHASTLGMDPKFLRNQRFCKXGNLKP 176
           ++P+H S + +DPKF  ++ + +   + P
Sbjct: 17  QQPQHISGVVVDPKFPPSEEYNQNSYIPP 45


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 90  RKPRHASTLGMDPKFLRNQRFCKXGNLKP 176
           ++P+H S + +DPKF  ++ + +   + P
Sbjct: 17  QQPQHISGVVVDPKFPPSEEYNQNSYIPP 45


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 90  RKPRHASTLGMDPKFLRNQRFCKXGNLKP 176
           ++P+H S + +DPKF  ++ + +   + P
Sbjct: 17  QQPQHISGVVVDPKFPPSEEYNQNSYIPP 45


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 26  SXHHPNHHQNRKAHSQWSQKAKEAQAR 106
           S  HP+ HQ+  A  Q  Q  +   AR
Sbjct: 20  SAEHPHQHQHYGAAVQVPQGGRRRAAR 46


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 92  EAQARIHPWHG 124
           EA   + PWHG
Sbjct: 58  EAPKPVEPWHG 68


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 92  EAQARIHPWHG 124
           EA   + PWHG
Sbjct: 58  EAPKPVEPWHG 68


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 92  EAQARIHPWHG 124
           EA   + PWHG
Sbjct: 58  EAPKPVEPWHG 68


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 92  EAQARIHPWHG 124
           EA   + PWHG
Sbjct: 58  EAPKPVEPWHG 68


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 92  EAQARIHPWHG 124
           EA   + PWHG
Sbjct: 58  EAPKPVEPWHG 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,140
Number of Sequences: 336
Number of extensions: 1028
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)