Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D13
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.0  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   5.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   6.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 124  DNQLVDDLIA*-SRGLKNNF*FGFWNDDAED 35
            DN+  + + A  S+G+K     G WND A D
Sbjct: 1879 DNKFYEKVTAYKSKGIKVLVAIGGWNDSAGD 1909



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -3

Query: 124  DNQLVDDLIA*-SRGLKNNF*FGFWNDDA 41
            DN+    +++  SRG+K     G WND A
Sbjct: 2377 DNEFYKKVVSYKSRGVKVLIALGGWNDSA 2405


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 169 FFSAYEDFVEFIYCNDNQLVDDL 101
           FF+  E   ++  CND Q+ + L
Sbjct: 45  FFADAEQCDKYYECNDGQITEKL 67


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
 Frame = -3

Query: 169 FFSAYEDFVEFIYCN------DNQLVDDLIA*SRGLKNNF 68
           FF A+   +  ++C       DN  VD+++A  R LKN F
Sbjct: 3   FFIAFLMLLGAVWCEQYTTKYDNINVDEILASERLLKNYF 42


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 160 AYEDFVEFIYCNDNQLVDDLIA*SRGLKN 74
           A+  F+E     DN  +DD+++  R LKN
Sbjct: 12  AHVVFLEEYVIPDNIDIDDILSNERLLKN 40


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 233 IGSRIHIIMKNDKEMV 280
           +GS   +I+KN KEMV
Sbjct: 350 LGSDGSVILKNYKEMV 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,279
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)