Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D11
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 276 1e-74
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 29 2.7
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 6.3
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical p... 28 8.3
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 8.3
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 8.3
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 8.3
L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 276 bits (677), Expect = 1e-74
Identities = 128/209 (61%), Positives = 156/209 (74%), Gaps = 3/209 (1%)
Frame = +3
Query: 141 SNIVXXARKIIEANXLDDXXXXXXXXXXXXX-LP--VDKVDIIISEWMGYCLFYESMLDT 311
SN+ +RKII N LD LP ++KVDIIISEWMGYCLFYESML+T
Sbjct: 94 SNMALTSRKIIADNNLDHIVEVIQAKVEDVHELPGGIEKVDIIISEWMGYCLFYESMLNT 153
Query: 312 VLYARDKWLKPDGMMFPDRCTLFICGIEDRQYKDEKINWWDDVYGFDMSSIRKVAISEPL 491
VL ARD+WL P+GM+FPD+ L++C IEDRQYK++KI+WWD VYGF+MS+I+ VAI EPL
Sbjct: 154 VLVARDRWLAPNGMLFPDKARLYVCAIEDRQYKEDKIHWWDSVYGFNMSAIKNVAIKEPL 213
Query: 492 VDVVDAKQVVTNSSLLKEIDLYTVKKEDLNFESKFHLHVRRNDFIQALVTYFNVEFTKSH 671
VD+VD QV TN+ LLK++DLYTVK EDL F+S F L R+D+IQA VT+F VEF+K H
Sbjct: 214 VDIVDNAQVNTNNCLLKDVDLYTVKIEDLTFKSDFKLRCTRSDYIQAFVTFFTVEFSKCH 273
Query: 672 KRLGFSTAPDAPYTHWKXTVFYFDDFMTV 758
K+ GFST PD YTHWK TVFY D +TV
Sbjct: 274 KKTGFSTGPDVQYTHWKQTVFYLKDALTV 302
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +3
Query: 243 DKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGMMFPDRCTLFI 383
+K DI++SE + C+F E +++T L A ++ + P + T+++
Sbjct: 231 EKADIVVSETLDCCVFGEKIVETFLDAHVRFSHDRTIFIPHQATVYV 277
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 453 MSSIRKVAISEPLVDVVDAKQVVTNSSLLKEIDLYTVKKEDLNFESKFHLHVRRNDFIQA 632
M ++ + + +V+VV K + LL E + TVKKE + + K + N+F Q
Sbjct: 603 MDAVAVFEVFQKIVEVV-RKHELDAEKLLVESHMITVKKEKVRRDCKNISLIPWNEFYQI 661
Query: 633 LVTYFNVE 656
+ T+ N E
Sbjct: 662 IHTHRNPE 669
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 532 DEFVTTCLASTTSTRGSDIATFLIEDMSKPYTSSHQLIFS 413
DE +C+AS + G+ +A FLI+ +KP +H+ F+
Sbjct: 3273 DEGKYSCIASNEA--GTAVADFLIDVFTKPTFETHETTFN 3310
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 532 DEFVTTCLASTTSTRGSDIATFLIEDMSKPYTSSHQLIFS 413
DE +C+AS + G+ +A FLI+ +KP +H+ F+
Sbjct: 3273 DEGKYSCIASNEA--GTAVADFLIDVFTKPTFETHETTFN 3310
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 532 DEFVTTCLASTTSTRGSDIATFLIEDMSKPYTSSHQLIFS 413
DE +C+AS + G+ +A FLI+ +KP +H+ F+
Sbjct: 3273 DEGKYSCIASNEA--GTAVADFLIDVFTKPTFETHETTFN 3310
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 532 DEFVTTCLASTTSTRGSDIATFLIEDMSKPYTSSHQLIFS 413
DE +C+AS + G+ +A FLI+ +KP +H+ F+
Sbjct: 3273 DEGKYSCIASNEA--GTAVADFLIDVFTKPTFETHETTFN 3310
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 532 DEFVTTCLASTTSTRGSDIATFLIEDMSKPYTSSHQLIFS 413
DE +C+AS + G+ +A FLI+ +KP +H+ F+
Sbjct: 3273 DEGKYSCIASNEA--GTAVADFLIDVFTKPTFETHETTFN 3310
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 527
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 527
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>Z47809-7|CAA87783.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.9 bits (59), Expect = 8.3
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 291 YESMLDTVLYARDKWLKPDGMMFPDRCTLFICGIEDRQYKDE-KINWWDDVYGFDMSSIR 467
Y+ + D A D + M D TLF+ +ED DE I D F S R
Sbjct: 35 YKKLSDQTFDAGDHFQIICEMNEDDEKTLFVRALEDLHNNDEDNIFLIDHFMSFSSESAR 94
Query: 468 K-VAISEPLVDVVDAKQVVTNSSLLKEIDLYTVKKEDLNFESKFHLHVRR 614
K V +E LV+ + + S +E+D TV+K + + E + H ++
Sbjct: 95 KCVESTEGLVERLAGLFGIDTDS-TEEVD-ETVEKIETSVEKEEAEHAKK 142
>Z47808-10|CAA87778.1| 662|Caenorhabditis elegans Hypothetical
protein D2013.9 protein.
Length = 662
Score = 27.9 bits (59), Expect = 8.3
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +3
Query: 291 YESMLDTVLYARDKWLKPDGMMFPDRCTLFICGIEDRQYKDE-KINWWDDVYGFDMSSIR 467
Y+ + D A D + M D TLF+ +ED DE I D F S R
Sbjct: 35 YKKLSDQTFDAGDHFQIICEMNEDDEKTLFVRALEDLHNNDEDNIFLIDHFMSFSSESAR 94
Query: 468 K-VAISEPLVDVVDAKQVVTNSSLLKEIDLYTVKKEDLNFESKFHLHVRR 614
K V +E LV+ + + S +E+D TV+K + + E + H ++
Sbjct: 95 KCVESTEGLVERLAGLFGIDTDS-TEEVD-ETVEKIETSVEKEEAEHAKK 142
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 527
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 527
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 360 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 527
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical
protein C06E1.7 protein.
Length = 365
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 579 NFESKFHLHVRRNDFIQALVTYFNVEFTK 665
NF S+ +H+RR DF+ NV F K
Sbjct: 199 NFISRICIHIRRTDFVDGQHHSSNVSFIK 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,693,579
Number of Sequences: 27780
Number of extensions: 305211
Number of successful extensions: 744
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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