Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D10
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.8  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 114 RVREQKHTVLRDHGRPLCQQD 176
           RV  Q    LR H R LCQ D
Sbjct: 159 RVSAQMKADLRSHFRALCQDD 179


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -1

Query: 561 RSRIRLRDLVSVYNKDMVVDLLDTSIVASQIKIRMVRQIYNGLLSC 424
           R+ + +  L+       + DL+       Q K+R   ++++ LLSC
Sbjct: 56  RNALLVLILLGALTYHAIFDLISFKDSDLQQKLRYFEEVFSSLLSC 101


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = -1

Query: 561 RSRIRLRDLVSVYNKDMVVDLLDTSIVASQIKIRMVRQIYNGLLSC 424
           R+ + +  L+       + DL+       Q K+R   ++++ LLSC
Sbjct: 56  RNALLVLILLGALTYHAIFDLISFKDSDLQQKLRYFEEVFSSLLSC 101


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 15  SVRHFVWGSAXVNSGPGQIRN 77
           S RH  W S  +N G  Q +N
Sbjct: 356 SNRHSAWQSHWLNKGAEQAKN 376


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 76  FRIXPGPELTXAEPQT 29
           +R   GP++T  EP+T
Sbjct: 277 YRSDEGPQITELEPET 292


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 76  FRIXPGPELTXAEPQT 29
           +R   GP++T  EP+T
Sbjct: 510 YRSDEGPQITELEPET 525


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 76  FRIXPGPELTXAEPQT 29
           +R   GP++T  EP+T
Sbjct: 510 YRSDEGPQITELEPET 525


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 149 PRSAAVPTGSAEQNSASTARLIN 217
           PRS A PTG    +++++   +N
Sbjct: 215 PRSVATPTGIPTPSTSASPPTVN 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,658
Number of Sequences: 336
Number of extensions: 2918
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)