Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_D10
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical ... 112 2e-25
AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical... 112 2e-25
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical pr... 29 3.2
AJ002897-1|CAA05732.1| 54|Caenorhabditis elegans protein tyros... 29 3.2
Z81063-5|CAB02956.1| 242|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46381-5|CAD92392.1| 328|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF125952-4|AAD14698.1| 330|Caenorhabditis elegans Hypothetical
protein C01B4.6 protein.
Length = 330
Score = 112 bits (270), Expect = 2e-25
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Frame = +1
Query: 7 GFSVSVISSGAPLQSIQVPXKSGITSAVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGA 186
G + +++ GA L + P K+G +VLGFD +D + ++ +G TVGR ANRI +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71
Query: 187 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTK-VIFSYLSKDGEEGYPGDLI 363
DG Y + N G +LHGG NG W + V FS + + ++G PGD
Sbjct: 72 TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131
Query: 364 TNITYEVTDDNALYVDFMSXXXXXXXXXXXXHSYFNLAGHDTGVQEIYNHIFVINADKIT 543
++TY V D N L ++ + H+Y+NL G DT + H + AD+
Sbjct: 132 IDVTYTVNDRNQLIIEHHATCDTPGLLALTNHAYWNLDGSDT----VAEHFLEMEADEFV 187
Query: 544 ETDSGSIPTG 573
E D PTG
Sbjct: 188 EVDDTFCPTG 197
>AC006722-10|ABP57811.1| 330|Caenorhabditis elegans Hypothetical
protein Y19D10A.16 protein.
Length = 330
Score = 112 bits (270), Expect = 2e-25
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Frame = +1
Query: 7 GFSVSVISSGAPLQSIQVPXKSGITSAVVLGFDELDGYVNRNTPYLGTTVGRCANRIGGA 186
G + +++ GA L + P K+G +VLGFD +D + ++ +G TVGR ANRI +
Sbjct: 13 GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEF-EKDAASIGKTVGRVANRIKNS 71
Query: 187 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTVDGTK-VIFSYLSKDGEEGYPGDLI 363
DG Y + N G +LHGG NG W + V FS + + ++G PGD
Sbjct: 72 TLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAPESVSFSVRANEQDDGLPGDAK 131
Query: 364 TNITYEVTDDNALYVDFMSXXXXXXXXXXXXHSYFNLAGHDTGVQEIYNHIFVINADKIT 543
++TY V D N L ++ + H+Y+NL G DT + H + AD+
Sbjct: 132 IDVTYTVNDRNQLIIEHHATCDTPGLLALTNHAYWNLDGSDT----VAEHFLEMEADEFV 187
Query: 544 ETDSGSIPTG 573
E D PTG
Sbjct: 188 EVDDTFCPTG 197
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 483 RYWCPRDLQPYLC----YKR*QDHGDGFWIDSDWWFY 581
RYW DL +LC +R HG G W D W++Y
Sbjct: 253 RYWKLLDL--FLCTAMPVERQLTHGCGIWFDEAWYWY 287
>Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical
protein M01B2.1 protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.2
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 41 RXSQFRSRXNPESPVPLFW 97
+ S +R + NP++P+P+FW
Sbjct: 342 KKSYYRMQCNPDTPLPIFW 360
>AJ002897-1|CAA05732.1| 54|Caenorhabditis elegans protein
tyrosine kinase protein.
Length = 54
Score = 28.7 bits (61), Expect = 3.2
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 41 RXSQFRSRXNPESPVPLFW 97
+ S +R + NP++P+P+FW
Sbjct: 21 KKSYYRMQCNPDTPLPIFW 39
>Z81063-5|CAB02956.1| 242|Caenorhabditis elegans Hypothetical
protein F15D3.7 protein.
Length = 242
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 1 SAGFSVSVISSGAPLQSIQVPXKSGITSAVVLGFDELD----GYVNRNTPYL 144
SAG + SV AP VP S +A VL D+L G + TPY+
Sbjct: 28 SAGMNFSVPGFDAPAPEPSVPDHSPFPAAPVLALDQLKSAGVGVSRQMTPYV 79
>Z46381-5|CAD92392.1| 328|Caenorhabditis elegans Hypothetical
protein M01F1.8a protein.
Length = 328
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = -1
Query: 588 YXYKTTSRNRSRIRLRDLVSVYNKDMVVDLLDTSIVASQIKIRMVRQIYNGLLSCRRHKV 409
+ Y +S+ R R+ + Y K+ + +KI+ + QI+ L R +V
Sbjct: 267 FDYFDSSKEACAARFRNFANTYRKNNPNCIFSQPCFEGALKIKYLNQIHEELTVMREGEV 326
Query: 408 DI 403
D+
Sbjct: 327 DV 328
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.9
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = -1
Query: 546 LRDLVSVYNKDMVVDLLDTSIVASQIKIRMVRQIYNGL 433
+ + + YNK + + LD + Q+K++++ Y+ +
Sbjct: 275 IAECIFFYNKGRIEEYLDEILTKKQLKLKIIEYFYDAM 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.136 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,004,487
Number of Sequences: 27780
Number of extensions: 276761
Number of successful extensions: 518
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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