Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D07
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.75 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 300 DHYIPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGG---AGNNWASGYAQGEKL 470
           D YI +      +P+V + + N     L N + +Y      G    GNNW S Y   +K+
Sbjct: 439 DKYIIQIWTTGSDPQVRNLLDNGYRVILSNYDALYFDCGFAGWVTDGNNWCSPYIGWQKV 498

Query: 471 NE 476
            E
Sbjct: 499 YE 500


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
 Frame = +1

Query: 208 LSTEYRLKAY*KSLHRRDLIVKM-----------CFSIKLMMITTYHEQFCW 330
           LS    +  Y KS HR ++ +K+           CF+  ++++TT++++  W
Sbjct: 43  LSIGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTW 94


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 540 IKQSPQGYHSHQPLC*LYQILPHSI 466
           IK SP+  H  Q L  +Y+IL  +I
Sbjct: 602 IKTSPKMRHELQKLAQVYRILGETI 626


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 205 HNCFQNSKPIW 173
           HNC   S P+W
Sbjct: 346 HNCPSRSHPVW 356


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 205 HNCFQNSKPIW 173
           HNC   S P+W
Sbjct: 353 HNCPSRSHPVW 363


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 531 SPQGYHSHQPLC*LY-QILPHSISPPEHILKPSCSLHP 421
           +P   H  QP    Y Q+ P  ++P  H+  P+   HP
Sbjct: 59  APAPGHGLQPTMGDYTQLQPQRLAPT-HLQSPNTQTHP 95


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 312 VCSDHHQLDRKTHLYDQI 259
           +C+ HH L +   L+++I
Sbjct: 854 ICTLHHHLSKLIRLFNEI 871


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 344 TRLQIQQNCSWYVVIIISLIEKH 276
           T LQI  N + + +III    KH
Sbjct: 325 TLLQIIGNVTTFFIIIIQFNNKH 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,378
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)