Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D02
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   3.9  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   5.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.1  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 243 SRFRIDVRPFTATKYTSRFSITNLEL 320
           S F  D+R F  T Y++ F++ +  L
Sbjct: 60  SSFEADLRQFYKTAYSAIFTVIDFSL 85


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = -2

Query: 759 CSSXKSFTSTTLPKVPSPSVSMILSAQEENAEKIHRDGVSSACVKW 622
           C+S       TLP   S   +     Q+E AEK+ R         W
Sbjct: 55  CTSEGRELKKTLPDALSSGCTKCNQKQKETAEKVIRHLTQKRARDW 100


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 590 TFQTVTSPTLTHFTQAEETPS 652
           TF  VTSPT+  F  +  T S
Sbjct: 59  TFSGVTSPTIMKFVLSFRTGS 79


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 590 TFQTVTSPTLTHFTQAEETPS 652
           TF  VTSPT+  F  +  T S
Sbjct: 59  TFSGVTSPTIMKFVLSFRTGS 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,007
Number of Sequences: 336
Number of extensions: 3081
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)