Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_D01
         (838 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   4.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.1  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   9.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.1  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 119 IEKTVKQVQNILQSHSELPRLTREEIIQLMND 214
           + KT   ++N+L  +     LTR +  +L ND
Sbjct: 104 VHKTTLTIENLLADYDFSETLTRAKFEELNND 135


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 68  FLWYFIAVMTVAESAVDIEKTVKQVQNIL 154
           F WY     T  + AV +   VKQV   L
Sbjct: 264 FRWYKFVEGTTRKQAVTLNDRVKQVAGTL 292


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 286 CDFNFIALFTALFRC*RFFVFSFDVIHQLYDL 191
           CD N I  F  + RC    +F + +    Y +
Sbjct: 377 CDINSIQYFCLMARCLNTLIFYYHISTYEYSI 408


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 632 GLKAKPGQDHF 664
           GLKA PG +HF
Sbjct: 291 GLKAPPGVEHF 301


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 295 VRCCDFNFIALFTALFRC 242
           V CCD NF      +F C
Sbjct: 160 VYCCDNNFNVFLRQVFTC 177


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 722 IDLPENILLTYDLI 763
           ID+PE I+L  D++
Sbjct: 477 IDIPETIVLVVDIV 490


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 104 ESAVDIEKTVKQVQNILQSHSELPRLTREEII 199
           E A  +E TVK +QN+ +  + +   T   ++
Sbjct: 76  EKADILEMTVKHLQNLQRQQAAMSAATDPSVV 107


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 722 IDLPENILLTYDLI 763
           ID+PE I+L  D++
Sbjct: 477 IDIPETIVLVVDIV 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,253
Number of Sequences: 336
Number of extensions: 3883
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)