Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C20
         (807 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    26   1.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   6.3  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   8.4  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 645 SPPDNHGYCSLGTSVDCVRAALVNSKIIIA 734
           SPP + G CS   +V+ V +  V+S ++ A
Sbjct: 32  SPPSDLGECSASPTVEVVASTSVDSAVVEA 61


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 453  TEKDAAYVTPECKDIFRSVSLFMAANVRKSV 545
            TEK   YV   C+D   SV+      +RK V
Sbjct: 1996 TEKAPKYVDVHCRDATDSVAQLYKQQIRKGV 2026


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 434 DVSQRSTFSYFGHGIEKRHRRGGRAPGRTRSVRI 333
           D+++ + F   G+ +   H RGGR P  T   R+
Sbjct: 347 DIAEENVFGA-GYLVVLSHLRGGRTPPETERDRL 379


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 17  SLPQSGPSLHFLALGRRRAGPXLHNASNRXHAI 115
           S+ QSGP+      GR    P L NAS    +I
Sbjct: 225 SVYQSGPTASQCKTGRNSKFPGLCNASEEPRSI 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,130
Number of Sequences: 2352
Number of extensions: 15399
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)