Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C18
         (692 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce...    64   2e-11
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy...    30   0.36 
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe...    26   4.5  
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|...    26   4.5  
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c...    25   7.9  

>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 520

 Score = 64.1 bits (149), Expect = 2e-11
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
 Frame = +3

Query: 192 FFGIXYAEPPLGPRRFQRPVRQYLASELNATRQCLP--CPQRDPYYPDR--------FIG 341
           F GI YA+PP+G  R++RPV      + +         CPQ  P+Y +R        F  
Sbjct: 21  FTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFKTICPQ--PFYNNRKNQVRNPDFKY 78

Query: 342 HEDCLCLNVFAPKMPGDERGCPVVFFVHGGNYKSGSASAY---GGQHLTQKDT----ILV 500
            EDCL LN++ P       G PV++F+HGG  + G+   Y     Q L    +    ILV
Sbjct: 79  DEDCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILV 138

Query: 501 TAQYRLGSLGYLS----TDERDAAGNVGLFDLHAVMAXIQDYITFFGGDPTRXVVMG 659
           +  +RL   G+L+     +E   + N G +D    +     +I  FGG+     V G
Sbjct: 139 SPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGG 195


>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 559

 Score = 29.9 bits (64), Expect = 0.36
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -1

Query: 410 YWATSFIARHFGSEYIETQTIFVTNKSVGIVRVSLRTR*ALSRGVQLTC*IL 255
           YW T F+    G ++I+ Q +F+T     I+  S  T   +S G +  C ++
Sbjct: 396 YWFTVFLVEKLGRKWIQLQGLFITGLMFAILAGSWDT---ISTGGRFACFVI 444


>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 513

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 687 VMQRSHPNLGPLQQXELDHHQKTLYSLE 604
           V+ +S P+L P    EL HH+ + YSL+
Sbjct: 385 VITQSRPSLFPTFYDELHHHRVSGYSLK 412


>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +3

Query: 366 VFAPKMPGDERGCPVVFFVHGGNYKSG---SASAYGGQHLTQKDTILVTAQYRL 518
           +F P     E G P   + HGG +  G   + +++      Q   ++V   YRL
Sbjct: 88  IFRPHGTAPEGGWPCFLWFHGGGWVLGNINTENSFATHMCEQAKCVVVNVDYRL 141


>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 625

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -1

Query: 386 RHFGSEYIETQTIFVTNKSV 327
           RHFG++Y++  T + TNK V
Sbjct: 442 RHFGAQYVDCDTDY-TNKGV 460


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,561,164
Number of Sequences: 5004
Number of extensions: 51105
Number of successful extensions: 118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)