Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_C17
(795 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16; Euk... 161 1e-38
UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14... 117 4e-25
UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2; ... 111 2e-23
UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n... 106 6e-22
UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3; Plasmod... 103 4e-21
UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11; ... 100 5e-20
UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY0677... 98 2e-19
UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, wh... 93 1e-17
UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),... 92 2e-17
UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3; ... 84 3e-15
UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia vil... 77 4e-13
UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 70 8e-11
UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 61 3e-08
UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida a... 56 1e-06
UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5; Trypanosomat... 51 3e-05
UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Re... 50 9e-05
UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces el... 40 0.072
UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1; Bigelowi... 37 0.67
UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2; Saccharom... 36 0.89
UniRef50_A0CXL8 Cluster: Chromosome undetermined scaffold_30, wh... 34 4.7
UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0... 33 8.3
UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1; C... 33 8.3
>UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16;
Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo
sapiens (Human)
Length = 86
Score = 161 bits (392), Expect = 1e-38
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + Y IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL+YFAI ENES
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES 60
Query: 232 KARVKFNLMERMLQPCGPPPEKPED 306
KARV+FNLME+MLQPCGPP +KPE+
Sbjct: 61 KARVRFNLMEKMLQPCGPPADKPEE 85
>UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14;
Eukaryota|Rep: Uncharacterized protein At3g23325 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 117 bits (281), Expect = 4e-25
Identities = 48/83 (57%), Positives = 66/83 (79%)
Frame = +1
Query: 58 ESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 237
+ +NI+SQLEHLQ+KY+GTGHAD +++EW +N RDS SY+GH +LSYFAI ENES
Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAENESIG 64
Query: 238 RVKFNLMERMLQPCGPPPEKPED 306
R ++N M++ML PCG PPE+ ++
Sbjct: 65 RERYNFMQKMLLPCGLPPEREDE 87
>UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 87
Score = 111 bits (267), Expect = 2e-23
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = +1
Query: 64 YNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARV 243
Y ++QLE L ++Y GTGHADTTKYEWL +QHRD+ S +GHP LL+Y ++ + E +AR
Sbjct: 7 YTANTQLEQLHARYTGTGHADTTKYEWLTHQHRDTLASIVGHPPLLAYLSVADGECQARE 66
Query: 244 KFNLMERMLQPCGPPPEKPED 306
+F + E+MLQPCG PP K E+
Sbjct: 67 RFEVTEKMLQPCGKPPGKTEE 87
>UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 10 - Entamoeba histolytica HM-1:IMSS
Length = 100
Score = 106 bits (255), Expect = 6e-22
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +1
Query: 70 IHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKF 249
+ +QLEH+Q KY+GTGH D +KYEW+ NQ RDS SY+GH L++Y A+ EN+S R ++
Sbjct: 9 LQTQLEHMQLKYVGTGHPDISKYEWICNQQRDSYASYIGHHSLMAYIAVAENQSIGRTRY 68
Query: 250 NLMERMLQPCG-PPPEK 297
+ERM PCG PPPEK
Sbjct: 69 QFLERMCDPCGKPPPEK 85
>UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
vivax
Length = 88
Score = 103 bits (248), Expect = 4e-21
Identities = 43/80 (53%), Positives = 61/80 (76%)
Frame = +1
Query: 58 ESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 237
+ +NIH+QLEHLQSKY G+GH+DTT++EWL N HRD+ S++GH L+YFAIVENE A
Sbjct: 5 DRFNIHAQLEHLQSKYQGSGHSDTTRWEWLTNIHRDTLASHVGHYSRLAYFAIVENEPIA 64
Query: 238 RVKFNLMERMLQPCGPPPEK 297
++++ ++ M P P P+K
Sbjct: 65 KIRYRCLQNMSLPVVPKPKK 84
>UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11;
Ascomycota|Rep: Uncharacterized protein C211.05 -
Schizosaccharomyces pombe (Fission yeast)
Length = 85
Score = 100 bits (239), Expect = 5e-20
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + ++LE LQ++Y+G G+A TTKYEW++NQHRD+ S +GHP LL+Y A E
Sbjct: 1 MADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEP 60
Query: 232 KARVKFNLMERMLQPCGPPP 291
+ +V+ NL+E+M+ PCGPPP
Sbjct: 61 RVQVRKNLLEKMIMPCGPPP 80
>UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY06774;
n=4; Aconoidasida|Rep: Putative uncharacterized protein
PY06774 - Plasmodium yoelii yoelii
Length = 103
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
Frame = +1
Query: 1 NFSRLYAFNKH--LAFKNKMG--ESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDS 168
N +R Y F K F KM + +NIH+QLEHLQSKY G+GHADTT++EWL N HRD+
Sbjct: 9 NITRQYKFYKKGIYFFTEKMSTFDRFNIHAQLEHLQSKYQGSGHADTTRWEWLTNIHRDT 68
Query: 169 CCSYMGHPDLLSYFAIVENESKARVKFNLME 261
S++GH L+YFAI ENE A++++ ++
Sbjct: 69 LASHVGHYSRLAYFAIAENEPIAKIRYRCLQ 99
>UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 88
Score = 92.7 bits (220), Expect = 1e-17
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + +N +Q EHL ++Y+GTG+ DT KY W + HRD+ S++GH + YF ENE
Sbjct: 1 MQDRFNFQTQTEHLHARYVGTGNPDTPKYVWNNHIHRDTLASHIGHHSRMVYFCTAENEP 60
Query: 232 KARVKFNLMERMLQPCGPPP 291
R+++ + +M+QPCGPPP
Sbjct: 61 MCRLRYKFLTKMIQPCGPPP 80
>UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),
putative; n=3; Eukaryota|Rep: Splicing factor 3B subunit
10 (SF3b10), putative - Babesia bovis
Length = 87
Score = 91.9 bits (218), Expect = 2e-17
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +1
Query: 58 ESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 237
+ +NIH+QLEHLQSKY GTGH + TK+EW +N RD+ S+ GH L+YFAI ENES +
Sbjct: 5 DRFNIHAQLEHLQSKYQGTGHVNNTKWEWALNIQRDTLASHAGHYTRLAYFAICENESIS 64
Query: 238 RVKFNLMERMLQP 276
R++ ++ M++P
Sbjct: 65 RIRHRCLQNMVKP 77
>UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 111
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + LE Q++YIGTGHADTTK+E+L N RDS SY+GHP LL Y A+ ES
Sbjct: 1 MADKLRTLQNLEAQQARYIGTGHADTTKHEFLNNIVRDSYASYIGHPPLLGYMALGMGES 60
Query: 232 KARVKFNLMERMLQPCGPPPE 294
+ +V+ ++E+M++ G PPE
Sbjct: 61 REKVRAMMVEKMVRGVGAPPE 81
>UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 121
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + +LE LQ+K+IGTGH DTT +EW N HRD+ S GHP LLSY A+ ENE
Sbjct: 1 MADKLRNQQELERLQAKFIGTGHPDTTSWEWKTNIHRDTYSSIAGHPPLLSYIALAENEP 60
Query: 232 KARVKFNLMERMLQPC 279
A+V+ ++ R+ PC
Sbjct: 61 VAKVRVQMI-RVWNPC 75
>UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia
villosa|Rep: CG11985-like protein - Boltenia villosa
Length = 49
Score = 77.4 bits (182), Expect = 4e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 178 YMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKP 300
Y+GHPDLLSY +I ENE+KARV+FNL+ RM QPCGPPP++P
Sbjct: 6 YIGHPDLLSYISIAENEAKARVRFNLLXRMFQPCGPPPDRP 46
>UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 53
Score = 69.7 bits (163), Expect = 8e-11
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = +1
Query: 139 EWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLME 261
EWL+NQHRDS +Y+GH +LL YFA+ ENE+KARV+FNL+E
Sbjct: 1 EWLVNQHRDSASAYIGHGNLLDYFALAENETKARVRFNLLE 41
>UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 85
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 70 IHSQLEHLQSKYIGTGHADTTKY-EWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVK 246
I+ QLE L SKY GTGH +T + EW N RD+ S + H +SYFAI EN SKAR+
Sbjct: 9 IYFQLEQLHSKYQGTGHINTKRSSEWGDNILRDTASSNIMHQSRISYFAIAENTSKARIS 68
Query: 247 FNLMERML 270
F ++E M+
Sbjct: 69 FRMLESMI 76
>UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 122
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +1
Query: 94 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQ 273
QS+Y+G G+ DTTK EW N RDS SY+GHP +LS+ ++ +++A + ++++ +
Sbjct: 51 QSRYLGVGNPDTTKQEWQTNVARDSYASYIGHPGVLSHMSLALGQTEAETRIQFLDKLAK 110
Query: 274 PCGPPPEKPED 306
P + D
Sbjct: 111 VGTQPKHENGD 121
>UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +1
Query: 85 EHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMER 264
E Q + TG DT K EW NQ R+S + + P LSY ++ + + VK NL+++
Sbjct: 15 EQQQLQNEDTGTPDTGKREWRENQVRESLATILLLPGFLSYQSMGLGQPEIVVKTNLIDK 74
Query: 265 MLQPCGPPPEKPED 306
M+QPCGP P P D
Sbjct: 75 MVQPCGPAPPAPVD 88
>UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida
albicans IPF11714 unknown function; n=2;
Saccharomycetaceae|Rep: Similar to ca|CA1331|IPF11714
Candida albicans IPF11714 unknown function -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 85
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +1
Query: 76 SQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNL 255
+Q L+SKYIG G+AD T+ E++ N +RD S H ++L Y +++ NE ++ +
Sbjct: 9 NQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNILYYNSVIINEPMELLRQKM 68
Query: 256 MERMLQPCGPPPEKPED 306
+++M P +KPE+
Sbjct: 69 IKKMASPIQNNAKKPEN 85
>UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5;
Trypanosomatidae|Rep: Sf3b complex subunit - Trypanosoma
cruzi
Length = 89
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +1
Query: 55 GESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESK 234
G +Y H +E + + GT +++K +WL QHRD+ S + H D L Y ++VEN +
Sbjct: 9 GLTYQPH--IEQVLLRNEGTLTLESSKDDWLRYQHRDTLASLILHRDRLEYLSLVENVAP 66
Query: 235 ARVKFNLMERMLQP 276
AR++ L+ER + P
Sbjct: 67 ARMERILLERAVDP 80
>UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Rep:
AFR059Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 84
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 91 LQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIV-ENESKARVKFNLMERM 267
++ K+IG G DT++ EWL HRD+ S +GH LL Y A+ +KA + ++ RM
Sbjct: 14 MKQKHIGLGTDDTSRDEWLTQVHRDTYNSLLGHSALLQYAALSGPTRNKAETRLAMVSRM 73
Query: 268 LQPCGPP 288
CG P
Sbjct: 74 ---CGGP 77
>UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 87
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 91 LQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKAR-VKFNLMERM 267
L+ KY+G G+ TTK EWL N +RD+ S GH L Y + + S R K +L+ +M
Sbjct: 14 LKQKYVGLGNEKTTKEEWLTNVNRDTYNSLQGHSASLEYITLGKRASSKRDTKVDLINKM 73
>UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 80
Score = 39.9 bits (89), Expect = 0.072
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +1
Query: 52 MGESYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 231
M + Q L+SKY G G++DTT E+ + D+ S H LL + A++ NE
Sbjct: 1 MADKIREKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLLLHNAVIRNEH 60
Query: 232 KARVKFNLMERM 267
V+ ++++
Sbjct: 61 PELVRQEYLKKL 72
>UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3b5 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 72
Score = 36.7 bits (81), Expect = 0.67
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 76 SQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNL 255
+QL+ L KY GTG+ T++ EW+ HRD+ + + LL ++ N + + +K L
Sbjct: 6 NQLDFLFWKYEGTGNRRTSEKEWISQIHRDNISFILENYGLLKALSLKYNVTVSTLKLFL 65
Query: 256 M 258
+
Sbjct: 66 L 66
>UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2;
Saccharomyces cerevisiae|Rep: RDS3 complex subunit 10 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 85
Score = 36.3 bits (80), Expect = 0.89
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 94 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKAR-VKFNLMERM 267
+ KYIG G TT+ +W N D+ + GH L Y ++ + R + +L++ M
Sbjct: 15 KQKYIGLGDESTTREQWQRNVRNDTLNTLQGHSASLEYVSLSRGDLSIRDTRIHLLKSM 73
>UniRef50_A0CXL8 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 509
Score = 33.9 bits (74), Expect = 4.7
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -1
Query: 771 VSYLTILHLYIIKMSKRNFSIFLKSIFMIKITPGYL---KNL*NYFVFKLYIKKAKWKSK 601
+S+ I+ LY + RN+ +FL + I PGY+ KNL +Y F + + KSK
Sbjct: 279 ISHPNIIRLYEWWLEIRNYQLFLYTQIEYCIYPGYISQSKNLLSYSYFYMNPMPQEQKSK 338
Query: 600 LIS 592
LI+
Sbjct: 339 LIN 341
>UniRef50_Q8IBH6 Cluster: Putative uncharacterized protein PF07_0118;
n=3; Plasmodium|Rep: Putative uncharacterized protein
PF07_0118 - Plasmodium falciparum (isolate 3D7)
Length = 5561
Score = 33.1 bits (72), Expect = 8.3
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -1
Query: 747 LYIIKMSKRNFSIFLKS-IFMIKITPGYLKNL*NYFVF-KLYIKKAKWKSKLISLR*NNM 574
L IIK +NFSIF + + + +I Y+ N N +F K YIK + K LI + +N+
Sbjct: 4649 LEIIKFYDKNFSIFTEEPLLLYQIKNTYMNNNINEIIFLKYYIKIDEQKDNLIHSKDDNI 4708
>UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
B0495.6 - Caenorhabditis elegans
Length = 87
Score = 33.1 bits (72), Expect = 8.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 55 GESYNIHSQLEHLQSKYIGT 114
GE +++ +QLEHLQSKY GT
Sbjct: 5 GERFHVLAQLEHLQSKYTGT 24
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,240,296
Number of Sequences: 1657284
Number of extensions: 13185589
Number of successful extensions: 30525
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30513
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -