Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C14
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    46   2e-07
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    35   3e-04
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   9.8  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   9.8  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    20   9.8  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    20   9.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.8  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +3

Query: 51  MSKFTLLFLVLACFIMAEAQLTFTSSWGGKXAAIAGTVSCRND-EALASIYKLIQNEAEK 227
           M +  L  L++    +  AQL FT +WG K A    +  C+   + +  IYK+IQNEA+K
Sbjct: 1   MHRVLLTVLLITIVGLCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQK 59

Query: 228 LLLCQK 245
           L+ C+K
Sbjct: 60  LVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 35.1 bits (77), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
 Frame = +3

Query: 51  MSKFTLLFLVLACFIMAEAQLTFTSSWGGKXAAIAGT--VSCRND-EALASIYKLIQ 212
           MS+  L+ +++A   +  AQL F++ WG +  + AG+   +C+   E +  IYK+IQ
Sbjct: 1   MSRMFLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 189 PRLHRSCRTQC 157
           P+LH  CR++C
Sbjct: 79  PQLHNLCRSEC 89


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 189 PRLHRSCRTQC 157
           P+LH  CR  C
Sbjct: 79  PQLHNLCRKNC 89


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 189 PRLHRSCRTQC 157
           P+LH  CR  C
Sbjct: 79  PQLHNLCRKNC 89


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 189 PRLHRSCRTQCRR 151
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 189 PRLHRSCRTQCRR 151
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 227 TPAMPEALSRH 259
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,624
Number of Sequences: 336
Number of extensions: 1943
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)