Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C13
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.72 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.72 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 339 KDKSVWFLDHDYLENMYGMFKKVNAREKVVG 431
           K KS +   HD L N+Y   K V A  K++G
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 339 KDKSVWFLDHDYLENMYGMFKKVNAREKVVG 431
           K KS +   HD L N+Y   K V A  K++G
Sbjct: 6   KVKSYFTTHHDTLHNIYTSMKPVYAICKLIG 36


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 665 SHXFSLLCTNFTWNMFK--GPRSWCTIIVYFLYCLVSF 558
           S  F L+  N   + F+    +S+CT +   +YC V+F
Sbjct: 20  SEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYCSVTF 57


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 647 LCTNFTWNMFKGPRSWCTIIVYFLYCLVSF 558
           +C NF +        +   + Y LYC  SF
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSF 554


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +3

Query: 675 LLRDIKDTTVGSLSQRITNQLL--GLKGLHSQLTEIXD 782
           L R+    T     + + + +L  G+KGLH  +T + D
Sbjct: 127 LTRETAKNTSHPFQRVLVHDILQPGVKGLHGPITRVID 164


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 288 GVLDVSNSFAVPFDEDDKDKSV 353
           G L+  ++ + P D+DDKD+ +
Sbjct: 225 GSLEDDDNISDPEDDDDKDQDM 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,727
Number of Sequences: 336
Number of extensions: 3492
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)