Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C10
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28732-8|AAB04898.1|   92|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical...    29   1.8  
Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    27   7.4  
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>U28732-8|AAB04898.1|   92|Caenorhabditis elegans Hypothetical
           protein F45E1.1 protein.
          Length = 92

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -1

Query: 127 AY*RWCRRKC--DRIPRA-PQRRGATQRFATAAWQMALNNWH 11
           A+  W +RK    R PRA P R   ++     A Q  +N WH
Sbjct: 23  AFREWLKRKAAEPRTPRASPSREAISKHLKDEARQRVINQWH 64


>AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical
           protein Y53F4B.12 protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 170 SVXXLKTSISACLMCLPSSGGPFRAFWPSTRPIAPLL--RTSPKAESALTSS 319
           ++   K  +S C +C   SGG   +F P+TR IA L   R  P A+   T S
Sbjct: 302 NIPAAKYMLSVCSVCA-LSGGVLASFLPATRVIAALCHDRLIPYAKDTSTKS 352


>Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical
           protein F53B6.2b protein.
          Length = 711

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 265 RSCRRPECPEWTSRRW 218
           R C R +CP W + +W
Sbjct: 531 RPCHREDCPRWEASQW 546


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 265 RSCRRPECPEWTSRRW 218
           R C R +CP W + +W
Sbjct: 865 RPCHREDCPRWEASQW 880


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 265  RSCRRPECPEWTSRRWKAHEAS*NGG 188
            R C R  CP W    W     S +GG
Sbjct: 1069 RECNRIPCPRWVYGHWSECSRSCDGG 1094


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 265  RSCRRPECPEWTSRRWKAHEAS*NGG 188
            R C R  CP W    W     S +GG
Sbjct: 1069 RECNRIPCPRWVYGHWSECSRSCDGG 1094


>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
           protein C37C3.6c protein.
          Length = 1487

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 265 RSCRRPECPEWTSRRWKAHEAS*NGGFQ 182
           ++C R  CPEW +  W A        FQ
Sbjct: 455 QTCNRFACPEWQAGPWSACSEKCGDAFQ 482


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
           protein C37C3.6a protein.
          Length = 1558

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 265 RSCRRPECPEWTSRRWKAHEAS*NGGFQ 182
           ++C R  CPEW +  W A        FQ
Sbjct: 455 QTCNRFACPEWQAGPWSACSEKCGDAFQ 482


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
           protein C37C3.6b protein.
          Length = 2167

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 265 RSCRRPECPEWTSRRWKAHEAS*NGGFQ 182
           ++C R  CPEW +  W A        FQ
Sbjct: 455 QTCNRFACPEWQAGPWSACSEKCGDAFQ 482


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,503,285
Number of Sequences: 27780
Number of extensions: 186077
Number of successful extensions: 491
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)