Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_C09
(799 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 30 0.33
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 29 0.58
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 28 1.8
SPAPB17E12.05 |rpl3703|rpl37|60S ribosomal protein L37|Schizosac... 27 2.4
SPCC1223.05c |rpl3702|rpl37-2, rpl37|60S ribosomal protein L37|S... 27 2.4
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 27 4.1
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 4.1
SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit L7|... 27 4.1
SPBC2D10.18 |abc1|coq8|ABC1 kinase family protein|Schizosaccharo... 26 7.2
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 26 7.2
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 9.5
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 9.5
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 9.5
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 517 CSSCIVRSTPWLPWRLRRKRTPSVWRSR 600
C C + PW R + TPSVW S+
Sbjct: 1499 CPDCCSKEGKLYPWNTRPRSTPSVWLSQ 1526
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -2
Query: 426 SDQDMNGIASPS---RPAEIMPLSQRTQKPRYSP 334
SD ++ G+ P +PA +PLS+R+ P Y+P
Sbjct: 30 SDPELIGLLKPDNVDKPANSIPLSKRSTSPSYAP 63
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 27.9 bits (59), Expect = 1.8
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +3
Query: 420 GLIRNLSQFTTSESAQAGVPQAPGKSKCHRLHL*QLHCTQHPLATLEATEETYPLRLEEP 599
GL+RNLS+F S S + VP+ K + L Q++ H L T++ P+ E P
Sbjct: 129 GLVRNLSEF-LSTSILSAVPRQ--KFLLYLLEKYQINLF-HREERL--TDQGRPVAFELP 182
Query: 600 VYGLMFQEVKYLLAPLWEDRTAXES-LCMWLV 692
+ K LL P W+ + S L W++
Sbjct: 183 PDKFHSDQSKALLEPKWKTKNYLISHLIFWII 214
>SPAPB17E12.05 |rpl3703|rpl37|60S ribosomal protein
L37|Schizosaccharomyces pombe|chr 1|||Manual
Length = 89
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 622 RSSTSWRRCGRTGLLXRASVCGSCCSRRCHDPX*TRSFSW 741
+S T RRCG+ + S C +CC + TRS++W
Sbjct: 14 KSHTICRRCGKRSFHIQKSTC-ACCG---YPAAKTRSYNW 49
>SPCC1223.05c |rpl3702|rpl37-2, rpl37|60S ribosomal protein
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 91
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 622 RSSTSWRRCGRTGLLXRASVCGSCCSRRCHDPX*TRSFSW 741
+S T RRCG+ + S C +CC + TRS++W
Sbjct: 14 KSHTICRRCGKRSFHIQKSTC-ACCG---YPAAKTRSYNW 49
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -1
Query: 385 SGDNAAIPTNPKT-----TIFPSVKNSGAFNFNLIGLGSIFPDDALSVSPASNHHLI 230
S + IP+ P T + + KNS A + +L + +D S+SPA +H +I
Sbjct: 449 SSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLHLAKMKLNNKNDESSLSPAKSHAVI 505
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -2
Query: 402 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIG 223
+ PS+P + +P+S +PP R +S+ S L + L +FP P ++ Y
Sbjct: 160 SKPSKPRKKVPVSHPLPP---TPPSREEHVSVPRESSLFTYEDDPLPSFPSPYMVDDYYT 216
Query: 222 SD 217
D
Sbjct: 217 QD 218
>SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit
L7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 287
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -2
Query: 432 SGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSG-----LVLFFLMT 268
S + D G S P+E+MPL + + P +PG +++ + L FF+ +
Sbjct: 214 SPTSGDQTGNISFGLPSEVMPLFPQIEAVYEMYPHSLPGFNVNITTNSKDTRLARFFVSS 273
Query: 267 LLAF 256
L+ F
Sbjct: 274 LIPF 277
>SPBC2D10.18 |abc1|coq8|ABC1 kinase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 610
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 743 SHEKERVXQGSWHLREQHEPHTEALXSSPVLPQRRQEV 630
S + ++ G HL+EQ + S P+LP ++ E+
Sbjct: 89 SLDVQKDASGVKHLQEQSSKEIKNPISQPILPNKKDEI 126
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 606 GLMFQEVKYLLAPLWEDRTAXES-LCMWLVLFTKVPRSLXNSFLLMAALTF 755
GL +E + L+ E+R +S + W VL +V ++ +L AAL+F
Sbjct: 29 GLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILAAALSF 79
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = +3
Query: 480 QAPGKSKCHRLHL*QLHCTQHPLATLEATEETYPLRLEEPVYGLMFQEVKY 632
Q PG L++ T HP+ + + YP + PV G+ + + +
Sbjct: 379 QHPGLRSLDPLNIQDGDLTMHPMHIRHSQSDFYPSGINTPVSGINYPNLGF 429
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 351 KPRYSPPLRIPGLSISTLSGLVLFFLMTLLAFPQPPIITSYIGSD 217
K Y+P I GL++ TLS +LM L+ P ++ + G D
Sbjct: 50 KVLYAPRTTIEGLNLPTLSSSYYKWLMDLVNIPD-DVVQNCAGLD 93
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -3
Query: 770 QYHPMERKRSHEKERVXQGSWHLREQHEPHTEALXSSPVLPQRRQE 633
+ H + KR H + V + Q +P + + SSP P ++E
Sbjct: 242 EQHAKKPKRKHTRSTVPTSNVEPVSQPQPSPDKIVSSPNPPSAKRE 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,126,879
Number of Sequences: 5004
Number of extensions: 64860
Number of successful extensions: 217
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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