Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C08
         (424 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.23 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.23 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.23 
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   0.92 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   2.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.6  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 274 ISAMRLHKICTGISDPYLYCQLA 206
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 274 ISAMRLHKICTGISDPYLYCQLA 206
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 274 ISAMRLHKICTGISDPYLYCQLA 206
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 242 RYLGPI--LVLPVGSLIASSLYLRPAISNH 159
           RY G I  L+LP+  L      ++ AISNH
Sbjct: 49  RYQGRISSLILPIYGLSTKPKIMQGAISNH 78


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 321 SMMLIAYDDEXGPCVYKTDPSGYY 392
           + +L+ Y +E    V K DP G Y
Sbjct: 101 TFVLLNYRNEWNQLVAKYDPDGIY 124


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 383 GGVCFVHTGPGFI 345
           GGVC +  G G+I
Sbjct: 388 GGVCRISDGGGYI 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,014
Number of Sequences: 336
Number of extensions: 1847
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)