Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C08
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    88   1e-19
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.0  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   8.0  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    22   8.0  

>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 87.8 bits (208), Expect = 1e-19
 Identities = 46/134 (34%), Positives = 74/134 (55%)
 Frame = +3

Query: 18  GLXSVALRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQVQRAR 197
           G  SV ++  +  V+A + K    L D  SV  +  +T+ IG + +GM  D R  V++AR
Sbjct: 32  GAPSVGIKAVNGVVIATENKQKSILYDEHSVHKVEMVTNHIGMIYSGMGPDYRLLVKQAR 91

Query: 198 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAXMRPLGCSMMLIAYDDEXGPCVYKTD 377
             A N+   Y   IP   L +++A + Q YTQ+  +RP G S+++  +DD   P +++ D
Sbjct: 92  KLAQNYYLTYREPIPTSQLVQKVATVMQEYTQSGGVRPFGVSLLICGWDD-GRPYLFQCD 150

Query: 378 PSGYYCSYKAVXAG 419
           PSG Y ++KA   G
Sbjct: 151 PSGAYFAWKATAMG 164


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -1

Query: 277 EISAMRLHKICTGISDPYLYCQLAAS*RARCT*DRLSAIIPVMTHPILSV 128
           E+ A+R  K  T   +PYL      + R +     ++ IIP M    L+V
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTV 262


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -1

Query: 277 EISAMRLHKICTGISDPYLYCQLAAS*RARCT*DRLSAIIPVMTHPILSV 128
           E+ A+R  K  T   +PYL      + R +     ++ IIP M    L+V
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFLTV 262


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/37 (21%), Positives = 18/37 (48%)
 Frame = +3

Query: 213 WQYKYGSEIPVHILCRRIADISQVYTQNAXMRPLGCS 323
           W +   + +    +  R+ +++Q+  +   M P GCS
Sbjct: 527 WDHDAEARLTAMCVQERLQEVAQINPRARTMPPKGCS 563


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = +3

Query: 168 DSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAXMRPLGCSMMLIAYDD 347
           ++R +V  A  +    Q+++GS+     L R +ADI + ++ +  M P   +   I+  +
Sbjct: 197 EARDKVIDALLKRHKHQHEFGSKKSRLPLIRSLADIGKNHSSSKNM-PRSSTSKSISSAN 255

Query: 348 EXGPCVYKTDPSGYY 392
                V  + PSG +
Sbjct: 256 SFPMHVVSSAPSGMH 270


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 103 AGSSSLSGTLR*AATTAASVPRNATDXNPPW 11
           AGS+S SGTLR AA     V    ++    W
Sbjct: 195 AGSTSDSGTLRAAAMDVLFVTARHSEHGMLW 225


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -1

Query: 277 EISAMRLHKICTGISDPYLYCQLAAS*RARCT*DRLSAIIPVMTHPILSV 128
           E+ A+R  K  T   +PYL      + R +     ++ IIP M    L++
Sbjct: 209 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTI 258


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 18/67 (26%), Positives = 25/67 (37%)
 Frame = +3

Query: 144 CVMTGMIADSRSQVQRARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAXMRPLGCS 323
           CV  G I D  S     R+         GS+   ++ C R +D  +    N  M P    
Sbjct: 58  CVAYGKINDVSSLSSIERFSFIKQIQCNGSDTVPYVCCPRDSDAYREPYVNETMVPKNRV 117

Query: 324 MMLIAYD 344
              IA+D
Sbjct: 118 ASRIAFD 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,804
Number of Sequences: 2352
Number of extensions: 8630
Number of successful extensions: 241
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)