Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_C05
(763 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 85 8e-17
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 84 1e-16
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 80 2e-15
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 77 2e-14
05_01_0103 + 686770-687017,687120-687270 77 2e-14
03_06_0479 + 34217170-34217172,34217337-34217786 72 6e-13
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 71 8e-13
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 71 8e-13
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 56 3e-08
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 38 0.007
12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665 30 1.7
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 2.3
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 5.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 5.3
01_06_1528 + 38011391-38011635,38012366-38012566,38012659-380128... 28 9.3
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 84.6 bits (200), Expect = 8e-17
Identities = 44/107 (41%), Positives = 63/107 (58%)
Frame = +2
Query: 131 QQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSW 310
QQ+ V+ +G Y F L ECRY +FDF++ T E +K K+F +SW
Sbjct: 58 QQVVVDRLGQPGESYDDFTACLP---ADECRYAVFDFDFV-----TDENCQKSKIFFISW 109
Query: 311 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 451
PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + V+ +
Sbjct: 110 APDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 156
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 84.2 bits (199), Expect = 1e-16
Identities = 45/143 (31%), Positives = 77/143 (53%)
Frame = +2
Query: 29 ASGCASFGRLQSHFXGXQSGQVSIVTLSSPSVSAQQLXVEPVGXRNAEYXQFLEDLQKGG 208
+SG A + F QS ++ +++ V+ +G R Y F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 209 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 388
+CR+ ++DF++ T+E K ++F + W PD AKV+ KMLY+SS + KK L G
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNG 135
Query: 389 VQKYIQATDLSEASQEAVEEKLR 457
+Q +QATD E S +A++++++
Sbjct: 136 IQLEVQATDAGEISLDALKDRVK 158
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 80.2 bits (189), Expect = 2e-15
Identities = 46/143 (32%), Positives = 70/143 (48%)
Frame = +2
Query: 5 FRASHQKMASGCASFGRLQSHFXGXQSGQVSIVTLSSPSVSAQQLXVEPVGXRNAEYXQF 184
F SH +SG ++ F Q + + +Q+ VE G Y F
Sbjct: 3 FMRSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDF 62
Query: 185 LEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFD 364
L L + +CRY L+DF++ T E +K K+F ++W P T++++ KMLYS+S D
Sbjct: 63 LASLPEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKD 114
Query: 365 ALKKSLVGVQKYIQATDLSEASQ 433
+K+ L G IQATD +E Q
Sbjct: 115 RIKQELDGFHYEIQATDPTETPQ 137
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/108 (37%), Positives = 59/108 (54%)
Frame = +2
Query: 128 AQQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMS 307
A ++ VE +G Y F L ECRY ++D ++ T E +K K+F S
Sbjct: 44 AMEIKVERLGQTAEGYEDFAATLP---ADECRYAVYDLDFV-----TDENCQKSKIFFFS 95
Query: 308 WCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 451
W PDTA+ + KMLY+SS D ++ L G+Q IQATD SE S + + +
Sbjct: 96 WSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/104 (36%), Positives = 59/104 (56%)
Frame = +2
Query: 131 QQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSW 310
+ + VE VG Y F L ECRY +FD+++ T E +K K+F ++W
Sbjct: 32 KMVVVEKVGEPVLNYDDFAASLP---ANECRYAIFDYDFV-----TEENCQKSKIFFIAW 83
Query: 311 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 442
PDT++V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 84 SPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 71.7 bits (168), Expect = 6e-13
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Frame = +2
Query: 32 SGCASFGRLQSHFXGXQSGQVSIVTLSSPSVSAQQLXVEPVGXRNAEYXQFLEDLQKGGT 211
SG A ++ F ++G+ + + +Q+ V+ VG R+A + + L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 212 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMSWCPDTAKVKKKMLYSSSFDALK 373
CRY ++D ++T T+ A + + K+F +SW P A V+ KM+Y+SS + K
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
Query: 374 KSLVGVQKYIQATDLSEASQEAVEE 448
K L GVQ +QATD SE + + +++
Sbjct: 123 KELDGVQIDLQATDPSELTLDVLKD 147
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 71.3 bits (167), Expect = 8e-13
Identities = 34/107 (31%), Positives = 61/107 (57%)
Frame = +2
Query: 131 QQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSW 310
+++ VE G + F++ L + +CRY ++DF++ T E +K K+F ++W
Sbjct: 45 KEVVVEKTGSSTESFDDFMDSLPES---DCRYAIYDFDFV-----TEENCQKSKIFFVAW 96
Query: 311 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 451
P ++++ KMLY++S + ++ L GV IQATD SE E + E+
Sbjct: 97 SPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRER 143
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +2
Query: 131 QQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSW 310
QQ+ V+ +G Y F + ECRY +FDF++ T E +K K+F +SW
Sbjct: 303 QQVVVDRLGQPGDTYDDFTASMP---ASECRYAVFDFDFV-----TDENCQKSKIFFISW 354
Query: 311 CPDTAKVKKKMLYSSSFDALKKSLVGVQ 394
PDT+KV+ KMLY+SS D K+ L G+Q
Sbjct: 355 SPDTSKVRSKMLYASSKDRFKRELDGIQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = +2
Query: 131 QQLXVEPVGXRNAEYXQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSW 310
+++ VE G Y F L +CRY ++D ++ + + +K K+F +SW
Sbjct: 51 EEIVVEKTGAPGESYDDFTASLP---ADDCRYAVYDLDFV-----SDDNCRKSKIFFISW 102
Query: 311 CPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 463
P ++++ K +Y+ S + + L GV IQATD + E + + T
Sbjct: 103 SPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANRT 153
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 281 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRA 460
+K K+F +SW P + ++ K +Y+ + + L GV IQATD + E + +
Sbjct: 109 RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRANR 168
Query: 461 T 463
T
Sbjct: 169 T 169
>12_01_0696 + 5936869-5937068,5937705-5938179,5938240-5938665
Length = 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = -3
Query: 461 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTS 300
WR +SLRRP LPR R L C S++ + S P+RCP TTTS
Sbjct: 225 WR-SSLRRP---LPR-RHL-CVSDIGIDSASISSFSPAHLRLDHPFRCPATTTS 272
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 718 AAPPFKPKRITASRQK*AGGGGTYP 644
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/119 (20%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Frame = +2
Query: 179 QFLEDLQKGGTG-ECRYGL-FDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYS 352
+F+ +++ G G E + + DF Q + +EA+ FL+ + + + + + L+
Sbjct: 778 EFISEIKMGLHGYEMEFNMNLDFWSIIQKEAIAEAASNINSFLLKYSEENSCAEAQSLHM 837
Query: 353 SSFDALKKSLVGVQKYIQATD--LSEASQEAVEEKLRATDRQ*TAFTHELATKPNPLSD 523
D LK ++ I+ + LS+ +A+E+ L + + ++A + + +SD
Sbjct: 838 QEMDKLKLNVDTFNLVIREKEEYLSQIEFKAIEDHLDFLRHELDSLRGKVAKQDSGISD 896
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 367 SEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 483
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>01_06_1528 +
38011391-38011635,38012366-38012566,38012659-38012836,
38012946-38013208,38013380-38013649,38013753-38014950
Length = 784
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 74 GXQSGQVSIVTLSSPSVSAQQLXVEPVGXRNAEYXQFLEDLQKGGTG 214
G +SG + S+PS + P+ R+ + + D+++GG G
Sbjct: 4 GTESGSGGVAE-SAPSTPMSAMTTTPISARSVRWESDMPDIEEGGGG 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,545,417
Number of Sequences: 37544
Number of extensions: 470422
Number of successful extensions: 1574
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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