Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C04
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.46 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -2

Query: 268 LINNLS--ANITVS*RYCLYFFDFFLVRL 188
           L+ NL   A I  + RYC Y++ FF V L
Sbjct: 97  LLKNLESCAKIKKTKRYCYYYYAFFGVHL 125


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = -3

Query: 375 CVHCCLLFFIADRLRTNIQCC---QPFKLFKCSGLYK 274
           C HC + F  +++L+ ++      +PF+  KC G ++
Sbjct: 221 CEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFR 257


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/41 (19%), Positives = 19/41 (46%)
 Frame = -1

Query: 452 CLSHFLMLQFNWNAQHVNYVTFYLHVVYIAVYCFSLPIVCV 330
           CL +F +        +  Y  F +  +++  YC  + ++C+
Sbjct: 198 CLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCI 238



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 391 HFICMLCTLLFIVFHCRS 338
           +F C L  LL I + CR+
Sbjct: 287 YFYCALIILLCIYYFCRA 304


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
          protein.
          Length = 46

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
 Frame = +3

Query: 30 PWLXHRXARTSCSPPSFSC-YC 92
          PWL     RT      FSC YC
Sbjct: 20 PWLLQGHIRTHTGEKPFSCTYC 41


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 395 VTFYLHVVYIAVYCFS 348
           VTF + VVY+   C+S
Sbjct: 567 VTFVIDVVYVCDVCYS 582


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 470 FIIKWTLLLLLNIFEIIYSC 529
           F ++W  L +L I  + Y C
Sbjct: 269 FTLQWAFLQILEILALAYLC 288


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 395 VTFYLHVVYIAVYCFS 348
           VTF + VVY+   C+S
Sbjct: 292 VTFVIDVVYVCDVCYS 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,232
Number of Sequences: 336
Number of extensions: 2480
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)