Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C02
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p...    29   3.2  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.6  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.6  

>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
           protein T08A11.2 protein.
          Length = 1322

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/55 (40%), Positives = 25/55 (45%)
 Frame = +2

Query: 374 PSQIPRRGRAPSQPWTLSPSPARKTACKSPLHWRNGTPKLIASTTYSMASSTPLG 538
           PS   RR R     W L+PS     A  +PLH    TP    S T S  S TP+G
Sbjct: 313 PSASKRRSR-----WDLTPSQTPNVAAATPLHSGLQTP----SFTPSHPSQTPIG 358


>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
           protein T08A11.2 protein.
          Length = 1322

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/55 (40%), Positives = 25/55 (45%)
 Frame = +2

Query: 374 PSQIPRRGRAPSQPWTLSPSPARKTACKSPLHWRNGTPKLIASTTYSMASSTPLG 538
           PS   RR R     W L+PS     A  +PLH    TP    S T S  S TP+G
Sbjct: 313 PSASKRRSR-----WDLTPSQTPNVAAATPLHSGLQTP----SFTPSHPSQTPIG 358


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 443 KTACKSPLHWRNGTPKLIASTTYSMASSTP-LGLGAIRAVSENTWQSGETYSTP 601
           KT C        G+P +    +  M+SST  +G GA+   S +   SG   STP
Sbjct: 16  KTGCDVGCQTEQGSPSVFQQMSQLMSSSTSHVGTGAVDTTSSSASASGA--STP 67


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 443 KTACKSPLHWRNGTPKLIASTTYSMASSTP-LGLGAIRAVSENTWQSGETYSTP 601
           KT C        G+P +    +  M+SST  +G GA+   S +   SG   STP
Sbjct: 16  KTGCDVGCQTEQGSPSVFQQMSQLMSSSTSHVGTGAVDTTSSSASASGA--STP 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,651,892
Number of Sequences: 27780
Number of extensions: 409237
Number of successful extensions: 1359
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)