Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_C02
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.5  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    24   1.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   2.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   8.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   8.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 328 QIPLTDLPGTTVAAVSESDTTSWPGAV-AALDSLTVACEKDSMQVTITLAKRDP 486
           ++P   L G TV   S ++TT  PG +  + D+    C  ++      L  R P
Sbjct: 527 RMPRYCLFGNTVNLTSRTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGP 580


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 589 LQYTVPLKGCNTMSTDNDDGTVEYYNN 669
           LQY +     N +S+D+DD   EY  N
Sbjct: 62  LQYLIRSGQLNIISSDHDDSDEEYAAN 88


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 328 QIPLTDLPGTTVAAVSESDTTSWPGAV-AALDSLTVACEKDSMQVTITLAKRDP 486
           ++P   L G TV   S ++TT  PG +  + D+    C  ++      L  R P
Sbjct: 527 RMPRYCLFGNTVNLTSRTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGP 580


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 452 CKSPLHWRNGTPKLIASTTYSMASSTPLGLG 544
           CK  L     +PK +A    S +SS  L LG
Sbjct: 351 CKPELGQSQSSPKFVARREESNSSSPSLDLG 381


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +1

Query: 46  KRTLSKKKTNPKTSHNKISSS-VFPYTKQKTDTDYVYS 156
           KR  S     P T H K+    +FP      D +Y YS
Sbjct: 109 KRPASPGYVQPPTKHQKLDQKFIFPQENNYND-NYFYS 145


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 494 IASTTYSMASSTPLGLGAIRAVSENTWQSGET 589
           IAS   S  SS+P   GA  A   +    GET
Sbjct: 517 IASAPSSSTSSSPPAKGAAAAGQPSKRNGGET 548


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 674 MMLL*YSTVPSSLSVDMVLQPFKGTVYCRS 585
           M+ L ++T+P  LS  +VL     TVY  S
Sbjct: 139 MLYLLFATLPLRLSFCVVLACSTATVYVMS 168


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 738 PAPRPHAFPRVPPEG 782
           P P PH  P+ P  G
Sbjct: 23  PQPSPHQSPQAPQRG 37


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 473 ASVMVTCMLSFSQATVRESRAATAPGHDVV 384
           A V++  +L+ +   +  +    APGHD +
Sbjct: 4   AIVLLLALLTLAAGEIAHNDPHFAPGHDAI 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,413
Number of Sequences: 438
Number of extensions: 5188
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)