Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B21
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 153 9e-37
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 153 9e-37
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 151 3e-36
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 63 1e-09
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 63 1e-09
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 63 1e-09
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 62 2e-09
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 60 1e-08
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 153 bits (370), Expect = 9e-37
Identities = 91/253 (35%), Positives = 135/253 (53%), Gaps = 5/253 (1%)
Frame = +1
Query: 43 VALRGYAQAAPA--VKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
VA + A AAPA ++ + LPN +A+L+N SPV+R+ + KAGSRYE + L
Sbjct: 18 VAPKVKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNL 77
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L
Sbjct: 78 GTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFL 137
Query: 397 NNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRI 570
N+ + EFR WE+ D P+LK D + PQ ++ LH AAYR L N L+ RI
Sbjct: 138 LNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRI 197
Query: 571 NDISSESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGE 747
++SE L F + T +R A+ +G S + Q L + + Y GGE
Sbjct: 198 GKVTSEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGE 257
Query: 748 LRKEIGGDLXHVA 786
+R++ G L H A
Sbjct: 258 IREQNGDSLVHAA 270
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 153 bits (370), Expect = 9e-37
Identities = 91/253 (35%), Positives = 135/253 (53%), Gaps = 5/253 (1%)
Frame = +1
Query: 43 VALRGYAQAAPA--VKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
VA + A AAPA ++ + LPN +A+L+N SPV+R+ + KAGSRYE + L
Sbjct: 18 VAPKVKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNL 77
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L
Sbjct: 78 GTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFL 137
Query: 397 NNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRI 570
N+ + EFR WE+ D P+LK D + PQ ++ LH AAYR L N L+ RI
Sbjct: 138 LNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRI 197
Query: 571 NDISSESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGE 747
++SE L F + T +R A+ +G S + Q L + + Y GGE
Sbjct: 198 GKVTSEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGE 257
Query: 748 LRKEIGGDLXHVA 786
+R++ G L H A
Sbjct: 258 IREQNGDSLVHAA 270
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 151 bits (366), Expect = 3e-36
Identities = 90/253 (35%), Positives = 135/253 (53%), Gaps = 5/253 (1%)
Frame = +1
Query: 43 VALRGYAQAAPA--VKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
VA + A AAPA ++ + LPN +A+L+N SPV+R+ + KAGSRYE + L
Sbjct: 18 VAPKVKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNL 77
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +E L
Sbjct: 78 GTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFL 137
Query: 397 NNLVSNQEFRPWELNDNAPRLKYD--IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRI 570
N+ + EFR WE+ D P+LK D + PQ ++ LH AAY+ L N L+ RI
Sbjct: 138 LNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQTHVIENLHAAAYQNALANPLYCPDYRI 197
Query: 571 NDISSESLQLFASQNITPSRCAVTVIGDSQERAALIV-QNLKLTSSDASQAEASTYYGGE 747
++SE L F + T +R A+ +G S + Q L + + Y GGE
Sbjct: 198 GKVTSEELHYFVQNHFTSARMALIGLGVSHPVLKQVAEQFLNMRGGLGLSGAKANYRGGE 257
Query: 748 LRKEIGGDLXHVA 786
+R++ G L H A
Sbjct: 258 IREQNGDSLVHAA 270
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Frame = +1
Query: 37 RHVALRGYAQAAPAVKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
R ALR A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 28 RTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNN 87
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+L
Sbjct: 88 GAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELL 147
Query: 397 NNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKR 567
++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 148 GDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSEN 207
Query: 568 INDISSESLQLFASQNITPSRCAVTVIGDSQERAAL 675
+ +S L + S + R + G + + L
Sbjct: 208 VRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLL 243
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Frame = +1
Query: 37 RHVALRGYAQAAPAVKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
R ALR A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 28 RTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNN 87
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+L
Sbjct: 88 GAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELL 147
Query: 397 NNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKR 567
++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 148 GDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSEN 207
Query: 568 INDISSESLQLFASQNITPSRCAVTVIGDSQERAAL 675
+ +S L + S + R + G + + L
Sbjct: 208 VRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLL 243
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 3/216 (1%)
Frame = +1
Query: 37 RHVALRGYAQAAPAVKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAEL 216
R ALR A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 28 RTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNN 87
Query: 217 GLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEIL 396
G + L A TKN +++++ +GA+++A RE Y ++A L A+E+L
Sbjct: 88 GAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELL 147
Query: 397 NNLVSNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYR-RGLGNSLFISPKR 567
++V N ++ + ++ +R V + LH A++ L ++ +
Sbjct: 148 GDIVQNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSEN 207
Query: 568 INDISSESLQLFASQNITPSRCAVTVIGDSQERAAL 675
+ +S L + S + R + G + + L
Sbjct: 208 VRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLL 243
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 62.5 bits (145), Expect = 2e-09
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 3/204 (1%)
Frame = +1
Query: 49 LRGYAQAAPAVKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 228
LR A V + + L + VA+ D+G V + AGSRYE + G +H
Sbjct: 42 LRSTQAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAH 101
Query: 229 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLV 408
L A TK S ++ ++ +GA+++A RE Y +A L A+EIL +++
Sbjct: 102 FLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 161
Query: 409 SNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDI 579
N E+ + ++ + ++ V D LH AY+ LG ++ + I I
Sbjct: 162 QNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSI 221
Query: 580 SSESLQLFASQNITPSRCAVTVIG 651
S + L + + + R + G
Sbjct: 222 SRKDLVDYITTHYKGPRIVLAAAG 245
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 59.7 bits (138), Expect = 1e-08
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Frame = +1
Query: 49 LRGYAQAAPAVKXXVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELGLSH 228
LR A V + + L + VA+ D+G V + AGSRYE + G +H
Sbjct: 33 LRSTQAATQVVLNVPETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAH 92
Query: 229 VLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIYYTLEATQDKLNDALEILNNLV 408
A TK S ++ ++ +GA+++A RE Y +A L A+EIL +++
Sbjct: 93 FPEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADII 152
Query: 409 SNQEFRPWELNDNAPRLKYDIISLPPQIRAV--DLLHKAAYRR-GLGNSLFISPKRINDI 579
N E+ + ++ + ++ V D LH AY+ LG ++ + I I
Sbjct: 153 QNSTLGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSI 212
Query: 580 SSESLQLFASQNITPSRCAVTVIG 651
S + L + + + R + G
Sbjct: 213 SRKDLVDYITTHYKGPRIVLAAAG 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,827,121
Number of Sequences: 237096
Number of extensions: 2284920
Number of successful extensions: 4258
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4255
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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