Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B21
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   7.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   7.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   7.5  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 518 QPIVVDWVTRSSSRQR 565
           QPI   W+TRS +R++
Sbjct: 81  QPISYKWITRSGTREQ 96


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 469 IISLPPQIRAVDLLHKAAYRRGLGNSLFISPKRIND--ISSESLQLFAS 609
           +I L  Q+   + +H ++  R L +S+F   +R+N   +S   L LF S
Sbjct: 294 MICLNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLRLSDAELGLFCS 342


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 185 LALVMNHKPNWD 220
           LAL +NH PN+D
Sbjct: 658 LALWLNHSPNYD 669


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 216 GIVACTTISCWTNNQ 260
           G+V  T+++CW  N+
Sbjct: 318 GLVGDTSLACWNENR 332


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 15  NSRRPLXSSCCAQGLR 62
           NS+ PL S  C  GL+
Sbjct: 54  NSKSPLLSCACPDGLK 69


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 15  NSRRPLXSSCCAQGLR 62
           NS+ PL S  C  GL+
Sbjct: 54  NSKSPLLSCACPDGLK 69


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 216 GIVACTTISCWTNNQ 260
           G+V+ T + CW  N+
Sbjct: 317 GLVSDTALGCWNENR 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.131    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,357
Number of Sequences: 438
Number of extensions: 4368
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)