Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B19
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 146 8e-35
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 146 8e-35
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 146 8e-35
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 146 8e-35
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 145 1e-34
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 145 1e-34
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 145 1e-34
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 145 1e-34
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 143 7e-34
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 143 7e-34
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 143 7e-34
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 143 7e-34
AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongatio... 143 7e-34
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 137 5e-32
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 103 7e-22
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 103 7e-22
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 103 7e-22
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 103 7e-22
AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongatio... 82 2e-15
BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein. 76 2e-13
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 63 9e-10
AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongatio... 62 2e-09
AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens ... 60 9e-09
D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein. 58 3e-08
BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3 pr... 58 3e-08
BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3 pr... 58 3e-08
AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3 pr... 58 3e-08
AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3 pr... 58 3e-08
AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3 pr... 58 3e-08
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat... 51 5e-06
AY481571-1|AAS49898.1| 1189|Homo sapiens death inducer-obliterat... 51 5e-06
AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterat... 51 5e-06
AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterat... 51 5e-06
AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterat... 51 5e-06
AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterat... 51 5e-06
AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein. 51 5e-06
BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open readi... 40 0.013
AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open readi... 40 0.013
AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open readi... 40 0.013
AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens ... 40 0.013
BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subuni... 39 0.023
AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional co-acti... 39 0.023
L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein. 38 0.031
BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongatio... 38 0.031
AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongatio... 38 0.031
BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein. 37 0.071
BC029069-1|AAH29069.1| 266|Homo sapiens SPOCD1 protein protein. 37 0.071
BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein. 37 0.071
AL354919-9|CAI16892.1| 696|Homo sapiens SPOC domain containing ... 37 0.071
AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing ... 37 0.071
AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens ... 37 0.071
AK091016-1|BAC03567.1| 696|Homo sapiens protein ( Homo sapiens ... 37 0.071
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 32 2.0
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 32 2.0
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 32 2.0
BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein. 32 2.0
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 32 2.0
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 32 2.0
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 32 2.0
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 32 2.0
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 32 2.0
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 32 2.0
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 32 2.0
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 146 bits (354), Expect = 8e-35
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E + +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 277 SKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX----XXXXXXXXXXXXXXXXXXLP-- 438
S D+EVI+L K+LIK+WKK L + LP
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 439 ------ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 600
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 601 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EEMASDE+K++
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEI 234
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 146 bits (354), Expect = 8e-35
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E + +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 277 SKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX----XXXXXXXXXXXXXXXXXXLP-- 438
S D+EVI+L K+LIK+WKK L + LP
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 439 ------ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 600
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 601 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EEMASDE+K++
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEI 234
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 146 bits (354), Expect = 8e-35
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E + +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 277 SKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX----XXXXXXXXXXXXXXXXXXLP-- 438
S D+EVI+L K+LIK+WKK L + LP
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 439 ------ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 600
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 601 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EEMASDE+K++
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEI 234
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 146 bits (354), Expect = 8e-35
Identities = 89/235 (37%), Positives = 119/235 (50%), Gaps = 12/235 (5%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E + +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 277 SKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX----XXXXXXXXXXXXXXXXXXLP-- 438
S D+EVI+L K+LIK+WKK L + LP
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 439 ------ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 600
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 601 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EEMASDE+K++
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEI 234
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 145 bits (352), Expect = 1e-34
Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTPNT-----------------TXXXXXXXXXXXXXXXXXX 411
D+EV SL K+LIK+WKK L P+T +
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 412 XXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYA 591
+SFP +T+D+VRLKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQ 178
Query: 592 EFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 179 EIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 145 bits (352), Expect = 1e-34
Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTPNT-----------------TXXXXXXXXXXXXXXXXXX 411
D+EV SL K+LIK+WKK L P+T +
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 412 XXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYA 591
+SFP +T+D+VRLKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQ 178
Query: 592 EFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 179 EIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 145 bits (352), Expect = 1e-34
Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTPNT-----------------TXXXXXXXXXXXXXXXXXX 411
D+EV SL K+LIK+WKK L P+T +
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 412 XXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYA 591
+SFP +T+D+VRLKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQ 178
Query: 592 EFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 179 EIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 145 bits (352), Expect = 1e-34
Identities = 87/238 (36%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTPNT-----------------TXXXXXXXXXXXXXXXXXX 411
D+EV SL K+LIK+WKK L P+T +
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 412 XXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYA 591
+SFP +T+D+VRLKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQ 178
Query: 592 EFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 179 EIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 143 bits (346), Expect = 7e-34
Identities = 86/238 (36%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTPNT-----------------TXXXXXXXXXXXXXXXXXX 411
D+EV SL K+LIK+WKK L P+T +
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 412 XXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYA 591
+SFP +T+D+V+LKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYVSSFPRAPSTSDSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQ 178
Query: 592 EFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 179 EIRNTDMKYKNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 143 bits (346), Expect = 7e-34
Identities = 88/239 (36%), Positives = 119/239 (49%), Gaps = 18/239 (7%)
Frame = +1
Query: 103 VEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 282
+E V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 283 DDEVISLCKTLIKNWKKFLSTP------------------NTTXXXXXXXXXXXXXXXXX 408
D+EV SL K+LIK+WKK L P N+
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKD 118
Query: 409 XXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIY 588
L +SFP +T+D+VRLKCRE+L AL+ + IY
Sbjct: 119 ETNARDTYL-SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIY 177
Query: 589 AEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+MT EEMASDE+K++
Sbjct: 178 QEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 236
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 143 bits (346), Expect = 7e-34
Identities = 83/200 (41%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX- 378
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L +
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 379 ---XXXXXXXXXXXXXXXXXXLP--------ASFPPQSNTTDAVRLKCRELLTQALKAAG 525
LP +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 526 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 705
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 706 ASRLAKMTPEEMASDEMKKL 765
++A MT EEMASDE+K++
Sbjct: 188 PQQIAVMTSEEMASDELKEI 207
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 143 bits (346), Expect = 7e-34
Identities = 83/200 (41%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX- 378
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L +
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 379 ---XXXXXXXXXXXXXXXXXXLP--------ASFPPQSNTTDAVRLKCRELLTQALKAAG 525
LP +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 526 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 705
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 706 ASRLAKMTPEEMASDEMKKL 765
++A MT EEMASDE+K++
Sbjct: 188 PQQIAVMTSEEMASDELKEI 207
>AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 246
Score = 143 bits (346), Expect = 7e-34
Identities = 83/200 (41%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTTXXXXXXX- 378
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L +
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 379 ---XXXXXXXXXXXXXXXXXXLP--------ASFPPQSNTTDAVRLKCRELLTQALKAAG 525
LP +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 526 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 705
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 706 ASRLAKMTPEEMASDEMKKL 765
++A MT EEMASDE+K++
Sbjct: 188 PQQIAVMTSEEMASDELKEI 207
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 137 bits (331), Expect = 5e-32
Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Frame = +1
Query: 238 TRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNT-----------------TXXX 366
TRIGM+VNA+RK S D+EV SL K+LIK+WKK L P+T +
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEA 82
Query: 367 XXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACG 546
+SFP +T+D+VRLKCRE+L AL+ +
Sbjct: 83 REESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGA 142
Query: 547 SPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKM 726
IY E +NTDM+YKNRVRSR++NLKD KNP LR N G I A+M
Sbjct: 143 DEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARM 202
Query: 727 TPEEMASDEMKKL 765
T EEMASDE+K++
Sbjct: 203 TAEEMASDELKEM 215
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 103 bits (247), Expect = 7e-22
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +1
Query: 463 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 642
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 643 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
+NLKDP+NP LR N +G ISA +AKMT EEMASDE+++L
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELREL 283
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E +++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 277 SKDDEVISLCKTLIKNWKKFLSTP 348
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 103 bits (247), Expect = 7e-22
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +1
Query: 463 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 642
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 643 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
+NLKDP+NP LR N +G ISA +AKMT EEMASDE+++L
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELREL 283
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E +++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 277 SKDDEVISLCKTLIKNWKKFLSTP 348
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 103 bits (247), Expect = 7e-22
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +1
Query: 463 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 642
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 643 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
+NLKDP+NP LR N +G ISA +AKMT EEMASDE+++L
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELREL 283
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E +++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 277 SKDDEVISLCKTLIKNWKKFLSTP 348
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 103 bits (247), Expect = 7e-22
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +1
Query: 463 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 642
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 155 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 214
Query: 643 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKL 765
+NLKDP+NP LR N +G ISA +AKMT EEMASDE+++L
Sbjct: 215 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELREL 255
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 214 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTP 348
+++ +L TRIG+ VN +RK D EV+SL K LIKNWK+ L +P
Sbjct: 10 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSP 54
>AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongation
factor A protein 2 (SII) protein.
Length = 86
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +1
Query: 580 CIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMK 759
CI+ NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EEMASDE+K
Sbjct: 6 CIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 65
Query: 760 KL 765
++
Sbjct: 66 EI 67
>BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein.
Length = 242
Score = 75.8 bits (178), Expect = 2e-13
Identities = 52/152 (34%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E + +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 277 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 420
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 421 XXXXLPASFPPQSNTTDAVRLKCRELLTQALK 516
+FPP T DAVR KCRE+LT AL+
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQ 151
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 63.3 bits (147), Expect = 9e-10
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +1
Query: 97 MXVEAAVMKIQKKLTKMTSEXGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 276
M E +++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 277 SKDDEVISLCKTLIKNWKKFLSTP 348
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 82
Score = 62.1 bits (144), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 53
>AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ39713 fis, clone SMINT2013170, weakly similar to
TRANSCRIPTION FACTOR S-II-RELATED PROTEIN 4. ).
Length = 217
Score = 60.1 bits (139), Expect = 9e-09
Identities = 33/104 (31%), Positives = 51/104 (49%)
Frame = +1
Query: 466 TDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVA 645
T +R KC ELL AL ++ ++ + +YK +RS+VA
Sbjct: 37 TTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVA 96
Query: 646 NLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEKF 777
NLK+P+N L+ N +G S A+MT EMA+ E+K+L +
Sbjct: 97 NLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELKQLRASY 140
>D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.
Length = 2044
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 971 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1028
>BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 583 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 756
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE+AS E+
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>AY481572-1|AAS49899.1| 2240|Homo sapiens death
inducer-obliterator-3 protein.
Length = 2240
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AY481571-1|AAS49898.1| 1189|Homo sapiens death
inducer-obliterator-2 protein.
Length = 1189
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 773
>AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein.
Length = 1223
Score = 50.8 bits (116), Expect = 5e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 595 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLXEK 774
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE+ S E+ E+
Sbjct: 748 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKER 807
>BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 223 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 336
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 223 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 336
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 238
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 223 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 336
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 104 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 140
>AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ32112 fis, clone OCBBF2001586, weakly similar to
TRANSCRIPTION ELONGATION FACTOR S-II. ).
Length = 208
Score = 39.5 bits (88), Expect = 0.013
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 223 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 336
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subunit
26 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.023
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 214 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional
co-activator CRSP70 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.023
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 214 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 205 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 205 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 205 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 339
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein.
Length = 1203
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 653 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 707
>BC029069-1|AAH29069.1| 266|Homo sapiens SPOCD1 protein protein.
Length = 266
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 35 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 89
>BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein.
Length = 342
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 51 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 105
>AL354919-9|CAI16892.1| 696|Homo sapiens SPOC domain containing 1
protein.
Length = 696
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 146 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 200
>AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing 1
protein.
Length = 342
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 51 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 105
>AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens
cDNA FLJ16587 fis, clone TESTI4000214, weakly similar
to Human transcription factor TFIIS. ).
Length = 1216
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 653 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 707
>AK091016-1|BAC03567.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ33697 fis, clone BRAWH2004068. ).
Length = 696
Score = 37.1 bits (82), Expect = 0.071
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 598 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKK 762
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+ ++A E+ +
Sbjct: 146 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR 200
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein.
Length = 312
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 202 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 357
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,996,437
Number of Sequences: 237096
Number of extensions: 1172147
Number of successful extensions: 5562
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 5498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5548
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -