Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B16
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 186 4e-47
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 186 4e-47
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 186 4e-47
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 186 4e-47
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 186 4e-47
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 186 4e-47
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 156 6e-38
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 130 4e-30
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 94 3e-19
M61877-1|AAA60577.1| 2429|Homo sapiens erythroid alpha spectrin ... 33 0.91
M61826-1|AAA60994.1| 2429|Homo sapiens alpha-spectrin protein. 33 0.91
M11049-1|AAA60569.1| 237|Homo sapiens SPTA1 protein. 33 0.91
AL353894-3|CAH73936.1| 2416|Homo sapiens spectrin, alpha, erythr... 33 0.91
AL353894-2|CAH73937.1| 2419|Homo sapiens spectrin, alpha, erythr... 33 0.91
D38024-1|BAA07227.1| 853|Homo sapiens facioscapulohumeral muscu... 29 8.5
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 186 bits (454), Expect = 4e-47
Identities = 87/139 (62%), Positives = 102/139 (73%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G IV +FGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKR 445
RDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 446 VHHYKRLNTFAYKRPSTYF 502
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 156 bits (378), Expect = 6e-38
Identities = 70/100 (70%), Positives = 80/100 (80%)
Frame = +2
Query: 203 HFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 382
+FGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 383 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 502
CRRP VKQFH+S I+FPLP RV + F KRP+T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 130 bits (313), Expect = 4e-30
Identities = 61/98 (62%), Positives = 71/98 (72%)
Frame = +2
Query: 86 IVAKSRFWSFLXQLKQFKQPTGXIVXXXXXXXXXXXXXXHFGIWLRYESRSGVHNMYREY 265
+VAKSRFW F+ QLK+ K+ +G V +FGIWLR +SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREY 97
Query: 266 RDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAA 379
RDL+ GAVTQCYRDMGARHRARAHSIQI+ VE I A+
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMMVEEIAAS 135
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.3 bits (224), Expect = 3e-19
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +2
Query: 305 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 484
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 485 RPSTYF 502
RP+T+F
Sbjct: 61 RPNTFF 66
>M61877-1|AAA60577.1| 2429|Homo sapiens erythroid alpha spectrin
protein.
Length = 2429
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 114 KDQKRDLATIGDRREKAQLRTREAWARDD 28
KDQ RDLA+ G+ +K QL RE AR+D
Sbjct: 1632 KDQARDLASAGNLLKKHQLLEREMLARED 1660
>M61826-1|AAA60994.1| 2429|Homo sapiens alpha-spectrin protein.
Length = 2429
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 114 KDQKRDLATIGDRREKAQLRTREAWARDD 28
KDQ RDLA+ G+ +K QL RE AR+D
Sbjct: 1632 KDQARDLASAGNLLKKHQLLEREMLARED 1660
>M11049-1|AAA60569.1| 237|Homo sapiens SPTA1 protein.
Length = 237
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 114 KDQKRDLATIGDRREKAQLRTREAWARDD 28
KDQ RDLA+ G+ +K QL RE AR+D
Sbjct: 182 KDQARDLASAGNLLKKHQLLEREMLARED 210
>AL353894-3|CAH73936.1| 2416|Homo sapiens spectrin, alpha,
erythrocytic 1 (elliptocytosis 2) protein.
Length = 2416
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 114 KDQKRDLATIGDRREKAQLRTREAWARDD 28
KDQ RDLA+ G+ +K QL RE AR+D
Sbjct: 1633 KDQARDLASAGNLLKKHQLLEREMLARED 1661
>AL353894-2|CAH73937.1| 2419|Homo sapiens spectrin, alpha,
erythrocytic 1 (elliptocytosis 2) protein.
Length = 2419
Score = 32.7 bits (71), Expect = 0.91
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 114 KDQKRDLATIGDRREKAQLRTREAWARDD 28
KDQ RDLA+ G+ +K QL RE AR+D
Sbjct: 1633 KDQARDLASAGNLLKKHQLLEREMLARED 1661
>D38024-1|BAA07227.1| 853|Homo sapiens facioscapulohumeral muscular
dystrophy protein.
Length = 853
Score = 29.5 bits (63), Expect = 8.5
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 22 PSVVPRPSLPGSQLRLFSPVSNCRQISFLVFPXPT*AVQAAHWXNCLY*GNSREKPH 192
P +VP SLPGS+ CR +V P + + + L GN RE PH
Sbjct: 204 PGMVPSLSLPGSKPATLQTPPRCRTRESIVRPSRRGGISSLGSRSGLLRGNERE-PH 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,666,310
Number of Sequences: 237096
Number of extensions: 1814232
Number of successful extensions: 5259
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5257
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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