Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B15
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.13 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.23 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 543 YNILXTDKPLFYTNNIISTVLYNFL 617
           YNIL   + +F+ N+ ++ +LYN +
Sbjct: 332 YNILYFSRIMFHINSAVNPILYNII 356


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 510 PARAPSHVDIP--YNILXTDKPLFYTNNIISTVLYNFL 617
           P     H++I   YNIL   + + Y N+ I+ +LYN +
Sbjct: 317 PEEQVYHLEIEKYYNILYFCRIMVYLNSAINPILYNLM 354


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -2

Query: 293 VHAVLCDFSDFTVVKLLT*CKKRVCELSAKHETVFVLVIQ 174
           ++ VL ++ DF+     +  K  + ++     T F+++IQ
Sbjct: 303 INVVLNNYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQ 342


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 267 AEVTKDCMDPEDDDGMIPYAAFLKKVMAXKTSQLVISL 380
           A+ T +C DPED  G   Y   L  + + + S+L+  L
Sbjct: 205 ADGTGNCEDPEDVPGCEDYYGDL-DLKSIRKSELLAGL 241


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -2

Query: 509 LRAPPEELSPPRALPAPVPQSRASVF*G 426
           ++A PE++S  R  P P        F G
Sbjct: 513 IKADPEKISAIRNFPVPQKTKHVRAFLG 540


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 267 AEVTKDCMDPEDDDGMIPY 323
           A+ T +C DPED  G   Y
Sbjct: 205 ADGTGNCEDPEDVPGCEDY 223


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 260 TVVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 150
           T  K L   K+ V  L      +F+L   + TF +IF
Sbjct: 80  TKAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIF 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,651
Number of Sequences: 336
Number of extensions: 2497
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)