Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B15
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   122   7e-30
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    31   0.031
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.50 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.50 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.67 
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   0.88 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.88 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   2.0  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   6.2  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   6.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.2  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   8.2  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  122 bits (295), Expect = 7e-30
 Identities = 56/81 (69%), Positives = 66/81 (81%)
 Frame = +3

Query: 105 PSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKD 284
           P  ++ +K K +G +EDFLECLKLYDKNE+G ML AELTH+L ALGE+LDD E+  V KD
Sbjct: 70  PIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKD 129

Query: 285 CMDPEDDDGMIPYAAFLKKVM 347
           CMDPEDDDG IPYA FLKK+M
Sbjct: 130 CMDPEDDDGNIPYAPFLKKMM 150



 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +2

Query: 5   LXALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQG 142
           L ALN NPT+  I                  FLPI+SQ KK+K+QG
Sbjct: 37  LRALNLNPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQG 82


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 522 PSHVDIPYNILXTDKPLFYT-NNIISTVLYNFLPLTV 629
           P+  DI + I+   K LFYT N I+ TVL +FL + V
Sbjct: 217 PTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLV 253


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 HVDIPYNILXTDKPLFYTNNII 593
           ++DI +NI    K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 528 HVDIPYNILXTDKPLFYTNNII 593
           ++DI +NI    K LFYT NII
Sbjct: 230 YLDITFNITMRRKTLFYTVNII 251


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 528 HVDIPYNILXTDKPLFYTNNIISTVL-YNFLPLTV 629
           ++DI +NI    K LFYT N+I   +  +FL + V
Sbjct: 226 YLDITFNITMRRKTLFYTVNLIIPCMGISFLTILV 260


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 510 PARAPSHVDIPYNILXTDKPLFYTNNII 593
           P  A  + DI +NI    K LFYT N+I
Sbjct: 233 PCCAEPYPDIFFNITLRRKTLFYTVNLI 260


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 240  GEKLDDSEVAEVTKDCMDPEDDDG 311
            G K+++  +AEV K  +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273



 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 273  LQRLHCRQASHLVQEACV*AQRQA*DRFRSCHTASD 166
            ++RL C +   LV+E     +R+  DRF   H  S+
Sbjct: 1783 IKRLSCAEICQLVKERARAKRREDVDRFDLQHADSN 1818


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 534 DIPYNILXTDKPLFYT-NNIISTVLYNFLPLTV 629
           DI +NI    K LFYT N II  V  +FL + V
Sbjct: 228 DIIFNITLRRKTLFYTVNLIIPCVGISFLSVLV 260


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 210 AELTHTLLALGEKLDDSEVAEVTKDCMDP 296
           AE    ++      DD    +VT++C+DP
Sbjct: 64  AESFKCVIVKNSTKDDVNKVQVTRECLDP 92


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 257 VVKLLT*CKKRVCELSAKHETVFVLVIQLQTFQEIF 150
           V+K L+ CK +V +L  +H      + Q +  ++IF
Sbjct: 130 VLKALSYCKPKVTQLQGRHVRTDEEMEQCEIAEDIF 165


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 43  RETRWYKEEGREAAHTRRVPSHLQPSKERQRPGERM 150
           RE    + E RE    R      +  +ER+R  ERM
Sbjct: 503 REKEQREREQREKEREREAARERERERERERERERM 538


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 204 LGAELTH---TLLALGEKLDDSEVAEVTKDCM 290
           LG EL     T + LG+   DSE A+ T  CM
Sbjct: 35  LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,735
Number of Sequences: 2352
Number of extensions: 10511
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)