Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B15
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 75 4e-14
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 75 4e-14
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 55 5e-08
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 55 5e-08
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 52 3e-07
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 38 0.006
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 38 0.006
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.019
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 35 0.057
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.13
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 0.53
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 31 0.70
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 31 0.70
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 31 0.70
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 31 0.70
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 0.93
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 31 0.93
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 3.7
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 28 6.5
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 28 6.5
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 27 8.6
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 27 8.6
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 27 8.6
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 27 8.6
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 27 8.6
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 27 8.6
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 27 8.6
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/82 (47%), Positives = 50/82 (60%)
Frame = +3
Query: 105 PSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKD 284
P + K K +G Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K
Sbjct: 68 PMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKG 127
Query: 285 CMDPEDDDGMIPYAAFLKKVMA 350
ED +GM+ Y F+KKV+A
Sbjct: 128 V---EDGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/82 (47%), Positives = 50/82 (60%)
Frame = +3
Query: 105 PSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKD 284
P + K K +G Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K
Sbjct: 68 PMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKG 127
Query: 285 CMDPEDDDGMIPYAAFLKKVMA 350
ED +GM+ Y F+KKV+A
Sbjct: 128 V---EDGEGMVKYEDFIKKVLA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 111 TAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 290
T RK K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA- 129
Query: 291 DPEDDDGMIPYAAFL 335
D DG + Y F+
Sbjct: 130 -DIDGDGQVNYEEFV 143
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 153 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 332
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 333 LKKVMAXK 356
L +MA K
Sbjct: 70 L-TMMARK 76
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 111 TAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 290
T RK K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA- 129
Query: 291 DPEDDDGMIPYAAFL 335
D DG + Y F+
Sbjct: 130 -DIDGDGQVNYEEFV 143
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = +3
Query: 153 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 332
+F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEF 69
Query: 333 LKKVMAXK 356
L +MA K
Sbjct: 70 L-TMMARK 76
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +3
Query: 111 TAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 290
T RK K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 20 TVMARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA- 78
Query: 291 DPEDDDGMIPYAAF 332
D DG I +F
Sbjct: 79 -DIDGDGQIMRVSF 91
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 102 FPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 281
F S +K R+ T E+F+E L +DK NG++ AEL H L LGE+L D +V ++
Sbjct: 65 FQSVSKNREKHT---VEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS 121
Query: 282 DCMDPEDDDGMIPYAAFLKKVM 347
D G + + F++ VM
Sbjct: 122 ---GHNDSHGNVNISDFVRAVM 140
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +3
Query: 45 RNSVVQRRRARSCSHSKSSF----PSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGA 212
+NS V + A+ ++ SF P + R K + EDF++ L +DK G + A
Sbjct: 42 KNSDVHQCLAKFDKTARISFENFLPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSA 101
Query: 213 ELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 347
EL L +G+KL D E ++ ++D+G I F+K +M
Sbjct: 102 ELRQVLTTMGDKLSDEEFDKLVAG----QEDNGKIKIETFVKTIM 142
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 87 HSKSSFPSTAKQRKTKTRGAYEDFLE-CLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 263
+ K F K K + ++ + K++DK+ NG + E H + +GE+ + E
Sbjct: 73 NGKIDFGEFCKMMKEMNKETDQELIRLAFKVFDKDGNGYITAQEFKHFMTTMGERFSEEE 132
Query: 264 VAEVTKDCMDPEDDD 308
V E+ ++ +D + D+
Sbjct: 133 VDEIIRE-VDKDGDE 146
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +3
Query: 150 EDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 329
++F + KL+DK+ N M EL + LG + E+ + + D +G I +
Sbjct: 23 QEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEY--DVDGNGKIDFGE 80
Query: 330 FLK--KVMAXKTSQLVISLVIR 389
F K K M +T Q +I L +
Sbjct: 81 FCKMMKEMNKETDQELIRLAFK 102
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 162 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 338
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 157 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 213
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 126 KTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 305
K T ++F E ++DK+ NG + EL + +LG+ + E+ E+ + D
Sbjct: 73 KQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDG 130
Query: 306 DGMIPYAAF---LKKVMAXKTSQLV 371
+G I + F +K++M S+++
Sbjct: 131 NGQIEFPEFCVMMKRMMKETDSEMI 155
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 162 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 338
E +++DK+ NG++ E + ++ +G + + EV E+ K+ D DG I Y F+K
Sbjct: 100 EAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEV--DVDGDGEIDYEEFVK 156
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 126 KTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 305
K T ++F E ++DK+ NG + EL + +LG+ + E+ E+ + D
Sbjct: 16 KQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEV--DIDG 73
Query: 306 DGMIPYAAF---LKKVMAXKTSQLV 371
+G I + F +K++M S+++
Sbjct: 74 NGQIEFPEFCVMMKRMMKETDSEMI 98
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 162 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 335
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 162 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 335
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 135 TRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGM 314
T +F E L+DK+ NG + EL + ALG+ + ++ E+ D D +G
Sbjct: 24 TEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDV--DLDGNGQ 81
Query: 315 IPYAAF---LKKVMAXKTSQLV 371
+ + F +K++M S+++
Sbjct: 82 VEFPEFCVMMKRIMKETDSEMI 103
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 174 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 338
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +3
Query: 162 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKK 341
EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F
Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEFTYM 191
Query: 342 VMAXKTSQLVI 374
V T ++
Sbjct: 192 VKNYMTDDDIV 202
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 69 RARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEK 248
+A SK S A Q KT ++F E + D+N++G++ ++L ++G+
Sbjct: 3 KAAKKKSSKKRSGSEAAQFDQKT---IQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQI 59
Query: 249 LDDSEVAEVTKDCMDP 296
DS++ + K+ P
Sbjct: 60 APDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 69 RARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEK 248
+A SK S A Q KT ++F E + D+N++G++ ++L ++G+
Sbjct: 3 KAAKKKSSKKRSGSEAAQFDQKT---IQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQI 59
Query: 249 LDDSEVAEVTKDCMDP 296
DS++ + K+ P
Sbjct: 60 APDSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 69 RARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEK 248
+A SK S A Q KT ++F E + D+N++G++ ++L ++G+
Sbjct: 3 KAAKKKSSKKRSGSEAAQFDQKT---IQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQI 59
Query: 249 LDDSEVAEVTKDCMDP 296
DS++ + K+ P
Sbjct: 60 APDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +3
Query: 69 RARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEK 248
+A SK S A Q KT ++F E + D+N++G++ ++L ++G+
Sbjct: 3 KAAKKKSSKKRSGSEAAQFDQKT---IQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQI 59
Query: 249 LDDSEVAEVTKDCMDP 296
DS++ + K+ P
Sbjct: 60 APDSQIDAMIKEASGP 75
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 317 PLRSIPEEGHGVXDITTRHIFSYKIVTFLRRMCDGWDPKRPKPGT 451
P R +P G + TT + S + T R G+ P+RP+PGT
Sbjct: 313 PSRPVPPTSDGHIEATTPYNPSAQYPTGKRGSHPGFGPQRPRPGT 357
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 21 QTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGL 200
Q P PS N +Q + + K+ F + ++ + + G +K Y++NE+GL
Sbjct: 156 QHPQVYPSINGGLQHSHSATAIPEKTRFSAPVERERVR-EGEAPPMYPSIKTYERNEHGL 214
Query: 201 M 203
M
Sbjct: 215 M 215
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 630 VQSKVESCTKQLILCCSYKKGVCPYXRCYTGCRRGWE 520
V VE C Q+ C + C Y + G +RGW+
Sbjct: 520 VYEPVEFCGAQMHTNCPSEDSFCKYCKALRGTQRGWK 556
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 509 LRAPPEELSPPRALPAPVPQSRASV 435
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/92 (20%), Positives = 35/92 (38%)
Frame = +3
Query: 30 HWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLG 209
H + R + + RR H + S A+ + A + + D+ + +G
Sbjct: 707 HHEEHRRRLEEHRRREEEHHRRQEEESRARALQQSLLHASQVESTEVTFQDEYDGDSGVG 766
Query: 210 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 305
A+GE +D V + DC+D D+
Sbjct: 767 CLEHEFQCAIGECIDKRRVCDTRPDCLDASDE 798
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/92 (20%), Positives = 35/92 (38%)
Frame = +3
Query: 30 HWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLG 209
H + R + + RR H + S A+ + A + + D+ + +G
Sbjct: 707 HHEEHRRRLEEHRRREEEHHRRQEEESRARALQQSLLHASQVESTEVTFQDEYDGDSGVG 766
Query: 210 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 305
A+GE +D V + DC+D D+
Sbjct: 767 CLEHEFQCAIGECIDKRRVCDTRPDCLDASDE 798
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +3
Query: 39 PSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAEL 218
P R S+ R ++ + S F ++ + + A+ +L+DK+ NG + EL
Sbjct: 5 PRRVSLFNRWASKQTNEPVSGFDGLNEEEIMEYKAAF-------RLFDKDGNGSISSKEL 57
Query: 219 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF---LKKVMAXKTSQLV 371
+ +LG+ + E+ ++ + D G I + F +K++ S+++
Sbjct: 58 GVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEFCQMMKRMNKENDSEMI 109
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +3
Query: 39 PSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAEL 218
P R S+ R ++ + S F ++ + + A+ +L+DK+ NG + EL
Sbjct: 5 PRRVSLFNRWASKQTNEPVSGFDGLNEEEIMEYKAAF-------RLFDKDGNGSISSKEL 57
Query: 219 THTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF---LKKVMAXKTSQLV 371
+ +LG+ + E+ ++ + D G I + F +K++ S+++
Sbjct: 58 GVAMRSLGQNPTEQELLDMVNEV--DIDGSGTIDFGEFCQMMKRMNKENDSEMI 109
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 90 SKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 263
S T K+R+T + LE + ++ E L L ELT + L KL D E
Sbjct: 353 SSHRIEETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERNMELQRKLKDEE 410
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 90 SKSSFPSTAKQRKTKTRGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 263
S T K+R+T + LE + ++ E L L ELT + L KL D E
Sbjct: 353 SSHRIEETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERNMELQRKLKDEE 410
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 525 SHVDIPYNILXTDKPLFYTNNII-STVLYNFLPLTV 629
+++D+ Y + KPLFYT N++ V +FL + V
Sbjct: 243 AYIDVTYYLQLRRKPLFYTVNLVFPCVGISFLTILV 278
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 525 SHVDIPYNILXTDKPLFYTNNII-STVLYNFLPLTV 629
+++D+ Y + KPLFYT N++ V +FL + V
Sbjct: 243 AYIDVTYYLQLRRKPLFYTVNLVFPCVGISFLTILV 278
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +3
Query: 153 DFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 332
+ ++ L D+N+ M EL L +GE++ E+ K + + +GM+P+ A
Sbjct: 81 EIIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEI----KYLLSKVEVNGMVPHQAL 136
Query: 333 LKKV 344
++ +
Sbjct: 137 IEYI 140
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 525 SHVDIPYNILXTDKPLFYTNNII-STVLYNFLPLTV 629
+++D+ Y + KPLFYT N++ V +FL + V
Sbjct: 243 AYIDVTYYLQLRRKPLFYTVNLVFPCVGISFLTILV 278
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 22 KPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGER 147
+ H G HRE R +KE R+ H + S+ R +R
Sbjct: 297 RDHRGEHREHREHKEHRRDDRHRSERSERSERSERSDRERKR 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,662,482
Number of Sequences: 27780
Number of extensions: 237230
Number of successful extensions: 885
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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