Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B12
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    25   1.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    25   1.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    25   1.0  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    24   1.3  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   7.1  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   7.1  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   7.1  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   7.1  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   7.1  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   7.1  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   7.1  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   7.1  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 161 SISKSSNYNRYNYKKI 114
           S+S + NYN  NYKK+
Sbjct: 84  SLSNNYNYNNNNYKKL 99


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 161 SISKSSNYNRYNYKKI 114
           S+S + NYN  NYKK+
Sbjct: 84  SLSNNYNYNNNNYKKL 99


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 161 SISKSSNYNRYNYKKI 114
           S+S + NYN  NYKK+
Sbjct: 84  SLSNNYNYNNNNYKKL 99


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 167 N*SISKSSNYNRYNYKKI 114
           N +I  ++NYN YN KK+
Sbjct: 309 NKTIHNNNNYNNYNNKKL 326


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 149 SSNYNRYNYKKI 114
           ++NYN  NYKK+
Sbjct: 99  NNNYNNNNYKKL 110


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 149 SSNYNRYNYKKI 114
           ++NYN  NYKK+
Sbjct: 99  NNNYNNNNYKKL 110


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 149 SSNYNRYNYKKI 114
           ++NYN  NYKK+
Sbjct: 99  NNNYNNNNYKKL 110


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 149 SSNYNRYNYKKI 114
           ++NYN  NYKK+
Sbjct: 99  NNNYNNNNYKKL 110


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 99  NNYNKHNYNKL 109


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 161 SISKSSNYNRYNYK 120
           S+S + NYN  NYK
Sbjct: 317 SLSNNYNYNNNNYK 330


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 332 NNYNKHNYNKL 342


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -1

Query: 146 SNYNRYNYKKI 114
           +NYN++NY K+
Sbjct: 332 NNYNKHNYNKL 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,072
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 38
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)