Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B11
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 352 LHFCCNVLSISELKANIIYGPCLSKKHDPQLI---NSIVLIGI 233
           L FC N+LSI      I+Y    +  +D  +I    +I+++G+
Sbjct: 317 LRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGL 359


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -3

Query: 352 LHFCCNVLSISELKANIIYGPCLSKKHDPQLI---NSIVLIGI 233
           L FC N+LSI      I+Y    +  +D  +I    +I+++G+
Sbjct: 42  LRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGL 84


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 566  STSYISPFTLYPVPGLCNRNGTLYFVAMINGYFSFVIPSAIKV 438
            +  +I    L+P    C + G +Y+V + + Y   VI S   +
Sbjct: 985  AAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNM 1027


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 566  STSYISPFTLYPVPGLCNRNGTLYFVAMINGYFSFVIPSAIKV 438
            +  +I    L+P    C + G +Y+V + + Y   VI S   +
Sbjct: 985  AAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNM 1027


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -1

Query: 576 HFIVDFIYFTFHIISSSGTVQ*KWYIVF-CCYD 481
           HF   FI FT H++     +    +++F  C D
Sbjct: 168 HFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLD 200


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 673 VYFLKMFKPELLSKPFLEDYKSE 741
           ++F+K+F+PE L +   E  + E
Sbjct: 229 LFFVKVFRPEPLCERLFEASREE 251


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 169 LVNCQKLIRSGVNYHMPSIRTVSQST 246
           L N Q L +SG+NY   +   VS  T
Sbjct: 361 LNNIQNLSQSGINYKDTNDNNVSAVT 386


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 710 DSNSGLNIFRKYTQHFI 660
           D +S L   RKY  HFI
Sbjct: 79  DVSSVLKFIRKYGSHFI 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,793
Number of Sequences: 336
Number of extensions: 4326
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)