Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B11
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0725 + 35759792-35760358                                         70   2e-12
11_01_0238 - 1835056-1835110,1835671-1835849,1835941-1836246           54   1e-07
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545...    31   1.1  
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101...    28   10.0 

>03_06_0725 + 35759792-35760358
          Length = 188

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = +1

Query: 364 VFVYGTLKRNEPNHGTMTN-PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYN 540
           VF YGTLKR   NHG + +   +G A+F+    T  + PL+    Y VPFLL+ PG G+ 
Sbjct: 28  VFTYGTLKRGFSNHGLLQDLARDGDASFVGAATTAPRLPLVCGP-YRVPFLLNLPGAGHR 86

Query: 541 VKGEIYEVDDKMLSNLDILE 600
           V GE+Y V  + L  LD LE
Sbjct: 87  VSGELYAVTPRGLDRLDELE 106


>11_01_0238 - 1835056-1835110,1835671-1835849,1835941-1836246
          Length = 179

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
 Frame = +1

Query: 355 AHKVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGT- 531
           A  VFVYGTLKR  PNH  +    +G +  +    T     L++   Y+VPFLL  P + 
Sbjct: 22  ATMVFVYGTLKRGFPNHPLLA--ASG-SPLVGAASTATPASLVVG-PYSVPFLLPRPSSS 77

Query: 532 --GYNVKGEIYEVDDKMLSNLDILE-DHPNCYIRDKNDIVLTDST--VMKCWVYF 681
              + V GE+Y V  + L +LD LE  H   Y R K  +V+   +  V++   YF
Sbjct: 78  SGSHLVSGELYAVSPRALVDLDALEGTHLGVYERRKVTVVVEGGSGEVVEAEAYF 132


>08_01_0627 +
           5451140-5451839,5452635-5452662,5452730-5452786,
           5453205-5453874
          Length = 484

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = +3

Query: 312 FNSLIDNTLQQKCNGAQSIRLWYFKKK*TESRHHDEPRERGSDFYS*RND 461
           FN  +D+TLQ KC   +++RL Y      + + H +P   G+DF+S  +D
Sbjct: 386 FNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVH-KPIWSGADFFSDSDD 434


>03_02_1012 +
           13207907-13207990,13209196-13209280,13209402-13210186,
           13210262-13210462,13210580-13210690,13211105-13211487,
           13211594-13211702,13211786-13211866,13212088-13212156,
           13212379-13212467,13212619-13212780,13212859-13212916,
           13213143-13213373,13213516-13213662,13213779-13214333,
           13214562-13214819,13215096-13215203,13215760-13215854,
           13215946-13216102,13216466-13216666,13217542-13217670,
           13218292-13218567
          Length = 1457

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 20/85 (23%), Positives = 37/85 (43%)
 Frame = +1

Query: 544 KGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLKMFKPELLSKPFL 723
           KG+ YE+ ++ L    I+   P+   R++++        +K W        P    + F+
Sbjct: 313 KGDTYEIIERSLPKKQIIRKDPSEIAREESE------KTIKLWHAIAVKGIPR-HHRNFM 365

Query: 724 EDYKSEGDHGLRYCERCKRDVXFKL 798
              K       R+ E C+R+V FK+
Sbjct: 366 ALLKKRQVDAKRFSENCQREVKFKV 390


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,209
Number of Sequences: 37544
Number of extensions: 387735
Number of successful extensions: 832
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)