Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B11
         (804 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004360-1|AAH04360.1|  216|Homo sapiens LOC87769 protein protein.    122   2e-27
BC001077-1|AAH01077.2|  153|Homo sapiens LOC87769 protein protein.    122   2e-27
AL136526-6|CAI39558.1|  153|Homo sapiens protein ( Human DNA seq...   122   2e-27

>BC004360-1|AAH04360.1|  216|Homo sapiens LOC87769 protein protein.
          Length = 216

 Score =  122 bits (294), Expect = 2e-27
 Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
 Frame = +1

Query: 364 VFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNV 543
           VFVYGTLKR +PNH  + +  +G A F A G T E YPL+IA ++N+P+LLH PG+G  V
Sbjct: 67  VFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLV 126

Query: 544 KGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS-----------TVMKCWVYFLKM 690
           +GE+Y VD++ML  LD  E  P  Y R    + L +            T ++C+VY    
Sbjct: 127 EGEVYAVDERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRAT 186

Query: 691 FKPELLSKPFLEDYKSEGDHGLRYCERCKR 780
           F PE    P  + Y SEG HGLRY  R  R
Sbjct: 187 FPPEWAQLPHHDSYDSEGPHGLRYNPRENR 216


>BC001077-1|AAH01077.2|  153|Homo sapiens LOC87769 protein protein.
          Length = 153

 Score =  122 bits (294), Expect = 2e-27
 Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
 Frame = +1

Query: 364 VFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNV 543
           VFVYGTLKR +PNH  + +  +G A F A G T E YPL+IA ++N+P+LLH PG+G  V
Sbjct: 4   VFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLV 63

Query: 544 KGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS-----------TVMKCWVYFLKM 690
           +GE+Y VD++ML  LD  E  P  Y R    + L +            T ++C+VY    
Sbjct: 64  EGEVYAVDERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRAT 123

Query: 691 FKPELLSKPFLEDYKSEGDHGLRYCERCKR 780
           F PE    P  + Y SEG HGLRY  R  R
Sbjct: 124 FPPEWAQLPHHDSYDSEGPHGLRYNPRENR 153


>AL136526-6|CAI39558.1|  153|Homo sapiens protein ( Human DNA
           sequence from clone RP11-151A6 on chromosome
           13q32.21-33.3Contains the 3' end of the PCCA gene for
           propionyl Coenzyme A  ).
          Length = 153

 Score =  122 bits (294), Expect = 2e-27
 Identities = 66/150 (44%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
 Frame = +1

Query: 364 VFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNV 543
           VFVYGTLKR +PNH  + +  +G A F A G T E YPL+IA ++N+P+LLH PG+G  V
Sbjct: 4   VFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTLEPYPLVIAGEHNIPWLLHLPGSGRLV 63

Query: 544 KGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDS-----------TVMKCWVYFLKM 690
           +GE+Y VD++ML  LD  E  P  Y R    + L +            T ++C+VY    
Sbjct: 64  EGEVYAVDERMLRFLDDFESCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRAT 123

Query: 691 FKPELLSKPFLEDYKSEGDHGLRYCERCKR 780
           F PE    P  + Y SEG HGLRY  R  R
Sbjct: 124 FPPEWAQLPHHDSYDSEGPHGLRYNPRENR 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,548,142
Number of Sequences: 237096
Number of extensions: 2211162
Number of successful extensions: 3915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3912
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)