Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B11
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical pr...   126   1e-29
Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protei...    28   9.0  
AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal chem...    28   9.0  

>U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical
           protein F42A10.9 protein.
          Length = 156

 Score =  126 bits (305), Expect = 1e-29
 Identities = 63/138 (45%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
 Frame = +1

Query: 361 KVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYN 540
           KVFVYGTLK  EPN+  ++  + G   FI+ G T EK+PL++ TKYN+PFLL   G G N
Sbjct: 6   KVFVYGTLKTGEPNYKVLSETD-GEYRFISSGTTVEKFPLVVGTKYNIPFLLDDAGNGNN 64

Query: 541 VKGEIYEVDDKMLSNLDILEDHPNCYIRDKNDIVLTDSTVMKCWVYFLKMFKPELL--SK 714
           ++GE+YEV +K L  LD LE +P  Y R K +I L   T    ++Y LK ++P+LL  S 
Sbjct: 65  IEGEMYEVCEKKLKVLDELEAYPTLYDRKKVEIKLPSGTTETAFIYLLKSWRPDLLSTSS 124

Query: 715 PFLEDYKSEGDHGLRYCE 768
             + +Y S G HG  Y +
Sbjct: 125 EMMTNYSSLGAHGRPYVD 142


>Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical
           protein K03H1.13 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 628 KNDIVLTDSTVMKCWVYFLKMFKPELLSKPFLEDYKSEGD 747
           ++++VLTDS     W +  K  +  LL  P  E+    GD
Sbjct: 197 EDEMVLTDSCYFMTWKFCKKFMENPLLRSPITEELCCYGD 236


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
 Frame = -2

Query: 554 ISPFTLYPVPGLCNRNGTLY-----FVAMINGYF-----SFVIPSAI 444
           I  FTL P  GLC +   LY     +V  IN +F     +F++P+AI
Sbjct: 166 IFTFTLNPALGLCRQYNVLYQFGHIYVFFINNWFNVKLDNFLVPNAI 212


>AJ277649-1|CAB90211.1|  917|Caenorhabditis elegans CHE-14 protein
           protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 610 NCYIRDKNDIVLTDSTVMKCWVYFLKMFK 696
           NC   D++DI +   T+  CW Y  ++F+
Sbjct: 193 NCTELDESDIKIVRKTIDNCWKYRTQIFE 221


>AF067618-5|AAC19198.2|  917|Caenorhabditis elegans Abnormal
           chemotaxis protein 14 protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 610 NCYIRDKNDIVLTDSTVMKCWVYFLKMFK 696
           NC   D++DI +   T+  CW Y  ++F+
Sbjct: 193 NCTELDESDIKIVRKTIDNCWKYRTQIFE 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,193,749
Number of Sequences: 27780
Number of extensions: 393462
Number of successful extensions: 979
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)