Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B10
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       32   0.023
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   4.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   6.1  

>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +2

Query: 596 ERCRSSRLNCLKTNCALVCETD*MCALLVVRTRERNVFFSDRKDDFTELNRCCIVXDVTC 775
           ER    R  CLK +CA   +T  +C +   R R R   F+  KDD   +N      D+T 
Sbjct: 300 ERSNIDRGECLKDHCAYGGKTC-VCCIESFRRRRRRDAFTPSKDDPIFVNEMLHKVDLTV 358

Query: 776 N 778
           N
Sbjct: 359 N 359


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 403 GVELAPAHPAKSRADVLLIKIPPVPPSRNG 492
           G +LA     + RADVLL+     PP+ NG
Sbjct: 37  GQDLALQAAREHRADVLLLSDIYRPPANNG 66


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 403 GVELAPAHPAKSRADVLLIKIPPVPPSRNGGHVFN 507
           G  LA     + RADVL++     PP+ NG   F+
Sbjct: 17  GQGLALQSAREHRADVLILSDMFTPPNNNGRWEFD 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,522
Number of Sequences: 2352
Number of extensions: 13377
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)