Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B10
         (787 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456525-1|CAG30411.1| 1198|Homo sapiens MTMR3 protein.                31   4.7  
BC151217-1|AAI51218.1| 1198|Homo sapiens myotubularin related pr...    31   4.7  
AF233438-1|AAF40205.1| 1198|Homo sapiens FYVE domain-containing ...    31   4.7  
AC003071-1|AAB83949.1|  882|Homo sapiens WUGSC:H_BK085E05.1 prot...    31   4.7  
AB002369-1|BAA20826.2| 1203|Homo sapiens KIAA0371 protein.             31   4.7  

>CR456525-1|CAG30411.1| 1198|Homo sapiens MTMR3 protein.
          Length = 1198

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
 Frame = -2

Query: 777  LQVTSXTIQHRFSSVKSSFLSEKNTLRSLVRTTSKA----HIQSVSHTSAQFVFKQFKRD 610
            + V + TIQ R   ++S    E  TL+  V+         ++ S  H +  F  +     
Sbjct: 1020 MSVYTDTIQQRLRQIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIP 1079

Query: 609  DRQRSISRQCLRYCTTA--AVKS*PCATKRDSE--RPIVEHMAA 490
            D + ++ + CL  C+T   +  S     K+D+E  R + +H+AA
Sbjct: 1080 DSESNLDQNCLSRCSTEIFSEASWEQVDKQDTEMTRWLPDHLAA 1123


>BC151217-1|AAI51218.1| 1198|Homo sapiens myotubularin related protein
            3 protein.
          Length = 1198

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
 Frame = -2

Query: 777  LQVTSXTIQHRFSSVKSSFLSEKNTLRSLVRTTSKA----HIQSVSHTSAQFVFKQFKRD 610
            + V + TIQ R   ++S    E  TL+  V+         ++ S  H +  F  +     
Sbjct: 1020 MSVYTDTIQQRLRQIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIP 1079

Query: 609  DRQRSISRQCLRYCTTA--AVKS*PCATKRDSE--RPIVEHMAA 490
            D + ++ + CL  C+T   +  S     K+D+E  R + +H+AA
Sbjct: 1080 DSESNLDQNCLSRCSTEIFSEASWEQVDKQDTEMTRWLPDHLAA 1123


>AF233438-1|AAF40205.1| 1198|Homo sapiens FYVE domain-containing dual
            specificity protein phosphatase FYVE-DSP1c protein.
          Length = 1198

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
 Frame = -2

Query: 777  LQVTSXTIQHRFSSVKSSFLSEKNTLRSLVRTTSKA----HIQSVSHTSAQFVFKQFKRD 610
            + V + TIQ R   ++S    E  TL+  V+         ++ S  H +  F  +     
Sbjct: 1020 MSVYTDTIQQRLRQIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIP 1079

Query: 609  DRQRSISRQCLRYCTTA--AVKS*PCATKRDSE--RPIVEHMAA 490
            D + ++ + CL  C+T   +  S     K+D+E  R + +H+AA
Sbjct: 1080 DSESNLDQNCLSRCSTEIFSEASWEQVDKQDTEMTRWLPDHLAA 1123


>AC003071-1|AAB83949.1|  882|Homo sapiens WUGSC:H_BK085E05.1 protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
 Frame = -2

Query: 777  LQVTSXTIQHRFSSVKSSFLSEKNTLRSLVRTTSKA----HIQSVSHTSAQFVFKQFKRD 610
            + V + TIQ R   ++S    E  TL+  V+         ++ S  H +  F  +     
Sbjct: 704  MSVYTDTIQQRLRQIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIP 763

Query: 609  DRQRSISRQCLRYCTTA--AVKS*PCATKRDSE--RPIVEHMAA 490
            D + ++ + CL  C+T   +  S     K+D+E  R + +H+AA
Sbjct: 764  DSESNLDQNCLSRCSTEIFSEASWEQVDKQDTEMTRWLPDHLAA 807


>AB002369-1|BAA20826.2| 1203|Homo sapiens KIAA0371 protein.
          Length = 1203

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
 Frame = -2

Query: 777  LQVTSXTIQHRFSSVKSSFLSEKNTLRSLVRTTSKA----HIQSVSHTSAQFVFKQFKRD 610
            + V + TIQ R   ++S    E  TL+  V+         ++ S  H +  F  +     
Sbjct: 1025 MSVYTDTIQQRLRQIESGHQQEVETLKKQVQELKSRLESQYLTSSLHFNGDFGDEVTSIP 1084

Query: 609  DRQRSISRQCLRYCTTA--AVKS*PCATKRDSE--RPIVEHMAA 490
            D + ++ + CL  C+T   +  S     K+D+E  R + +H+AA
Sbjct: 1085 DSESNLDQNCLSRCSTEIFSEASWEQVDKQDTEMTRWLPDHLAA 1128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,624,765
Number of Sequences: 237096
Number of extensions: 1737724
Number of successful extensions: 3451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3451
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)