Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B10
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.60 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   7.4  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 760 YNTAPVQFREIIFPIRKKYIALSRTYYKQGTHSI 659
           Y    ++  EII  + KK I L +  YK G  +I
Sbjct: 240 YGKNQIKLLEIIHGLTKKVIQLKKEEYKSGKRNI 273


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 683  LQARHTFNQSRTQARNLSSNNLSVTID 603
            LQ      Q RTQ RN+ S++ S  +D
Sbjct: 1645 LQDHDCIRQERTQQRNVISDSESGRLD 1671


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -2

Query: 348 VLCLMYKLQPK*DFIIKIKESIYKNSYTIDNGKTNATKENSNIVEXGEINV 196
           VLC +YK     + +I   E +  +   +D    N + E  + V+   I +
Sbjct: 317 VLCPLYKYLQLIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLIRI 367


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -2

Query: 348 VLCLMYKLQPK*DFIIKIKESIYKNSYTIDNGKTNATKENSNIVEXGEINV 196
           VLC +YK     + +I   E +  +   +D    N + E  + V+   I +
Sbjct: 332 VLCPLYKYLQLIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLIRI 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,485
Number of Sequences: 438
Number of extensions: 3495
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)