Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B09
(771 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 31 1.0
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 31 1.3
04_04_1682 + 35332907-35333720,35334583-35335202 30 2.4
01_06_1412 - 37140654-37141088,37141549-37142214 30 2.4
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 30 2.4
06_03_1304 - 29187930-29188273,29188926-29189039,29189453-291897... 29 4.1
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 29 4.1
01_05_0421 + 21990034-21990392,21991691-21992681 29 4.1
05_05_0022 + 21592403-21593083,21593720-21594208 29 5.4
04_04_0278 - 24106072-24106254,24106854-24106898,24106985-241070... 29 5.4
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 29 5.4
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 28 7.2
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 28 7.2
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 28 7.2
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 28 7.2
12_02_0728 + 22606447-22606461,22606651-22606971,22607821-226079... 28 9.5
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 28 9.5
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 28 9.5
03_06_0322 + 33114988-33115130,33116972-33117024,33117432-331177... 28 9.5
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 28 9.5
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 28 9.5
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 9.5
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33... 28 9.5
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
HD ++ H+ R H KC+RC +++ + H KI
Sbjct: 117 HDATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKI 163
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 IPKVDIKEELSFDNNCE-FDTSFHENSVETEFEIEDKNIKTSRANDLSLECHDCGELFKS 560
+P VD+ E + N E FDT+ +NS+ FEI + +A D++L GE+ K
Sbjct: 32 LPLVDVHYEGTLAENGEVFDTTHEDNSI-FSFEIGQGAV--IKAWDIALRTMKVGEVAKI 88
Query: 561 KCK 569
CK
Sbjct: 89 TCK 91
>04_04_1682 + 35332907-35333720,35334583-35335202
Length = 477
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 531 CHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKS--FKAYNLHKKISPAXCTVAKF 704
C DCGE+F L +H H S L E R S F++ L KK SP C + +
Sbjct: 249 CPDCGEIFVRPDSLHLHQSIRHAVSELGAEDTSRNIISIIFQSSWL-KKQSPV-CAIDRI 306
Query: 705 IXIEGEGK 728
+ + +
Sbjct: 307 LKVHNAAR 314
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 570 LRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
L+ H+KR H + +C RC + F + H+K
Sbjct: 277 LQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTHEK 310
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/47 (21%), Positives = 20/47 (42%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
HD ++ H+ R H KC++C +++ + H K+
Sbjct: 126 HDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKV 172
>06_03_1304 -
29187930-29188273,29188926-29189039,29189453-29189722,
29190098-29190234,29190483-29191159
Length = 513
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 567 KLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKISPAXCTVAKFIXIEGEGKNRMFYC 746
K++V +++ QSSY + E CK S + Y+ K+ A K I G R F C
Sbjct: 167 KMKVS-QQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIV---SGLERRF-C 221
Query: 747 KDC 755
+ C
Sbjct: 222 QQC 224
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 396 DIKEELSF---DNNCEFDTSFHENSVETEFEIEDKNIKTSRANDLSLECHDCGELFKSKC 566
DIKE+L++ D E DT+ +S+E +E+ D + T + E C E+
Sbjct: 212 DIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVIT-----IGAERFRCPEVLFQPS 266
Query: 567 KLRVHWKRAHQSSYLKCERC 626
+ + H+++Y +C
Sbjct: 267 FIGMEAPGIHEATYNSIMKC 286
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
HD ++ H+ R H KC++C +++ + H KI
Sbjct: 58 HDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI 104
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 570 LRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
L+ H+KR H + C RC + F + H+K
Sbjct: 285 LQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHEK 318
>04_04_0278 -
24106072-24106254,24106854-24106898,24106985-24107068,
24107191-24107389,24108281-24108432
Length = 220
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 507 RANDLSLECHDCGELFKSKCKLRVHWKRAHQSSY 608
RAN LS +CH EL + K+R H + H +Y
Sbjct: 119 RANHLSGDCHYKRELLRGFMKMRGHEQCIHMFAY 152
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 477 EIEDKNI----KTSRANDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKS 644
E+ED + K RA E C FK++ +L VH K + C R F+S
Sbjct: 522 ELEDNSTASKGKKKRAKRFQCEIDYCRMTFKNRAELSVHKKNT-----CTVKSCGRHFRS 576
Query: 645 FKAYNLHKKI 674
K H+ I
Sbjct: 577 HKYLRRHQSI 586
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
HD ++ H+ R H +CERC +++ + H K
Sbjct: 99 HDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVK 144
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
HD ++ H+ R H KC++C +++ + H KI
Sbjct: 95 HDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI 141
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 231 SIAKVEIVKGDSLPDCICNECFHELEKAVKF 323
S+ E+ D+ C C+ C L+K++KF
Sbjct: 199 SLGNSELENDDTTKSCACSFCLKALKKSIKF 229
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 534 HDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
HD ++ H+ R H KC++C +++ + H KI
Sbjct: 147 HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKI 193
>12_02_0728 +
22606447-22606461,22606651-22606971,22607821-22607941,
22608041-22608193,22608754-22609424
Length = 426
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -1
Query: 645 MI*TDVCIVHTLNSCSGGPFSNVLSACIYF*ITLHNHDILNSNHWLCS 502
M+ T++ + L+ +G PF+N+ + I F + D S+ W CS
Sbjct: 344 MVGTNISVAGVLSGINGDPFTNICLSNISFSLA----DSTQSSSWSCS 387
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +3
Query: 432 EFDTSFHENSVETEFEIEDKNIKTSRAN-----DLSLECHDCGELFKSKCKLRVHWKRAH 596
E + H ++++ KN K +R + S HD ++ H+ R H
Sbjct: 60 EQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALGDLTGIKKHYCRKH 119
Query: 597 QSSYLKCERCKRQFKSFKAYNLHKK 671
+C++C +++ + H K
Sbjct: 120 GEKKWRCDKCSKRYAVQSDWKAHSK 144
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 390 KVDIKEELSFDNNCEFDTSFHENSVETEFEIEDKNIKTSRANDLSLE 530
K D +EE DN E + E + E E EDK +T + N+ E
Sbjct: 193 KKDKEEETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKE 239
>03_06_0322 +
33114988-33115130,33116972-33117024,33117432-33117780,
33118450-33118518,33119015-33119150,33120048-33120080
Length = 260
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 513 NDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERC 626
++L ++C DC + F C + + K A + + C+ C
Sbjct: 193 DNLMIQCEDCSDWFHPSC-VEITIKEAKKLEHFYCKSC 229
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
Frame = +3
Query: 519 LSLECHDCGELFKSKCKLRVHWKRAHQSSY---------LKCERCKRQFKSFKAYNLHKK 671
LSL C DCG L +S + + H + + +++ L C C + +S +LH K
Sbjct: 4 LSLRCGDCGVLLRSVEEAQAHAEATNHANFSESTEAVLNLVCAACGKPCRSQTEVDLHTK 63
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 570 LRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
L+ H++R H + C RC ++F + H+K
Sbjct: 235 LQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEK 268
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 570 LRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
++ H+ R H KC+RC +++ + H K+
Sbjct: 151 IKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKV 185
>01_01_0047 +
334809-334877,334966-335074,335159-335299,336337-336498,
336577-336734,337180-337310,337385-337472,337587-337690,
338346-338444,339060-339116,339262-339337,339519-339602,
339969-340010,340128-340198,341516-341564,342370-342441,
343149-343286,343393-343473,344166-344353,344591-345188,
345274-345342,346729-346854,347048-347175,347986-348142,
348342-348388,348472-348535,348691-348765,349292-349414,
349797-349982,351179-351303,351390-351459,351974-352101,
352585-352726,353065-353163,353239-353285,353598-353652,
353758-353967,354686-354757,354836-354905,355231-355414,
355521-355644,355732-355863,356252-356317,356805-356852,
357572-357676,357728-357865,358097-358399,358482-358594,
359082-359148,359236-359310,359395-359517,359610-359618,
360156-360320,360401-360502,361545-361696,361794-361995,
362079-362126,362215-362298,362613-362657,363302-363385,
363890-363970,364044-364133,364217-364279,364824-364841,
365238-365378,365494-365550,366091-366185,366275-366383,
367067-367156,367308-367387,367480-367558,367742-367903,
368005-368136,368335-368469,368553-368618,369317-369457,
369575-369648,369685-369910
Length = 2905
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 586 FQCTLSLHLLLNNSP 542
F+CTL+LH+LL N P
Sbjct: 189 FRCTLTLHVLLENPP 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,104,409
Number of Sequences: 37544
Number of extensions: 344845
Number of successful extensions: 808
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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